PlantSME Plant secondary metabolism enzyme database

Carthamus tinctorius (carthamus_tinctorius)

Imported from atlas release summary for Carthamus tinctorius.

2021
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 627 19 BAHD (246) View species results
Alkaloid pathway 446 22 7DLGT (95) View species results
Phenylpropanoid pathway 394 11 POD (168) View species results
Flavonoid pathway 257 12 UFGT (170) View species results
Rosmarinic acid pathway 163 7 C4H (62) View species results
Steroid pathway 134 12 SMT1/SMT2/SMT3 (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1990 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 421 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
Reset
Gene Pathway Family Confidence Status
Ctin06G0030190.1 Steroid CYP90D1 low borderline
Ctin06G0030220.1 Steroid CYP90D1 low borderline
Ctin06G0030390.1 Steroid CYP90D1 low borderline
Ctin07G0012190.1 Steroid CYP90D1 medium borderline
Ctin07G0012970.1 Steroid CYP90D1 low borderline
Ctin07G0012970.4 Steroid CYP90D1 low borderline
Ctin09G0004990.1 Steroid CYP90D1 low borderline
Ctin09G0004990.2 Steroid CYP90D1 low borderline
Ctin09G0005000.1 Steroid CYP90D1 low borderline
Ctin09G0025450.1 Steroid CYP90D1 low borderline
Ctin09G0028030.1 Steroid CYP90D1 low borderline
Ctin09G0029380.1 Steroid CYP90D1 low borderline
Ctin10G0020740.1 Steroid CYP90D1 medium borderline
Ctin11G0019850.1 Steroid CYP90D1 low borderline
Ctin11G0022870.1 Steroid CYP90D1 low borderline
Ctin11G0024750.1 Steroid CYP90D1 low borderline
Ctin12G0017670.1 Steroid CYP90D1 low borderline
Ctin02G0010100.1 Steroid DET2 low borderline
Ctin02G0010600.1 Steroid DET2 low borderline
Ctin02G0010600.2 Steroid DET2 low borderline
Ctin07G0008970.1 Steroid DET2 low borderline
Ctin07G0008980.1 Steroid DET2 low borderline
Ctin07G0011450.1 Steroid DET2 low borderline
Ctin08G0005360.1 Steroid DET2 low borderline
Ctin08G0008530.1 Steroid DET2 low borderline
Ctin08G0011190.1 Steroid DET2 low borderline
Ctin09G0001460.1 Steroid DET2 low borderline
Ctin09G0001460.2 Steroid DET2 low borderline
Ctin09G0001460.3 Steroid DET2 low borderline
Ctin09G0025370.1 Steroid DET2 medium pass
Ctin09G0025370.2 Steroid DET2 medium pass
Ctin10G0025070.1 Steroid DET2 low borderline
Ctin02G0008210.1 Steroid DWF1 medium pass
Ctin04G0020920.1 Steroid DWF1 medium pass
Ctin07G0007060.1 Steroid DWF1 medium pass
Ctin01G0001970.1 Steroid DWF4/CYP90B1 medium borderline
Ctin01G0002600.1 Steroid DWF4/CYP90B1 low borderline
Ctin01G0004450.1 Steroid DWF4/CYP90B1 low borderline
Ctin01G0004930.1 Steroid DWF4/CYP90B1 medium borderline
Ctin01G0005310.1 Steroid DWF4/CYP90B1 low borderline
Ctin01G0007960.1 Steroid DWF4/CYP90B1 low borderline
Ctin01G0007960.2 Steroid DWF4/CYP90B1 low borderline
Ctin01G0007960.3 Steroid DWF4/CYP90B1 low borderline
Ctin01G0010670.1 Steroid DWF4/CYP90B1 low borderline
Ctin01G0010680.1 Steroid DWF4/CYP90B1 low borderline
Ctin01G0010730.2 Steroid DWF4/CYP90B1 low borderline
Ctin01G0010750.1 Steroid DWF4/CYP90B1 low borderline
Ctin01G0010780.1 Steroid DWF4/CYP90B1 low borderline
Ctin01G0010790.1 Steroid DWF4/CYP90B1 low borderline
Ctin01G0010810.1 Steroid DWF4/CYP90B1 low borderline