PlantSME Plant secondary metabolism enzyme database

Carthamus tinctorius (carthamus_tinctorius)

Imported from atlas release summary for Carthamus tinctorius.

2021
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 627 19 BAHD (246) View species results
Alkaloid pathway 446 22 7DLGT (95) View species results
Phenylpropanoid pathway 394 11 POD (168) View species results
Flavonoid pathway 257 12 UFGT (170) View species results
Rosmarinic acid pathway 163 7 C4H (62) View species results
Steroid pathway 134 12 SMT1/SMT2/SMT3 (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1990 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 421 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Ctin06G0000510.1 Alkaloid BBE medium borderline
Ctin06G0007100.1 Alkaloid BBE low borderline
Ctin06G0022340.1 Alkaloid BBE low borderline
Ctin07G0004370.1 Alkaloid BBE medium borderline
Ctin07G0004390.1 Alkaloid BBE low borderline
Ctin07G0004400.1 Alkaloid BBE medium borderline
Ctin10G0004120.1 Alkaloid BBE low borderline
Ctin10G0004120.2 Alkaloid BBE low borderline
Ctin10G0021150.1 Alkaloid BBE low borderline
Ctin04G0023610.1 Alkaloid CNMT low borderline
Ctin04G0023610.2 Alkaloid CNMT low borderline
Ctin05G0020640.1 Alkaloid CNMT medium borderline
Ctin07G0005630.1 Alkaloid CNMT low borderline
Ctin07G0007230.2 Alkaloid CNMT low borderline
Ctin07G0007230.3 Alkaloid CNMT low borderline
Ctin09G0003820.1 Alkaloid CNMT low borderline
Ctin09G0016420.1 Alkaloid CNMT low borderline
Ctin01G0003140.1 Alkaloid CODM/T6ODM low borderline
Ctin01G0009660.1 Alkaloid CODM/T6ODM medium borderline
Ctin01G0009670.1 Alkaloid CODM/T6ODM medium borderline
Ctin01G0009670.2 Alkaloid CODM/T6ODM medium borderline
Ctin01G0009920.1 Alkaloid CODM/T6ODM medium borderline
Ctin01G0009920.2 Alkaloid CODM/T6ODM medium borderline
Ctin01G0009920.3 Alkaloid CODM/T6ODM medium borderline
Ctin01G0009920.4 Alkaloid CODM/T6ODM medium borderline
Ctin01G0009940.1 Alkaloid CODM/T6ODM medium borderline
Ctin01G0009940.2 Alkaloid CODM/T6ODM medium borderline
Ctin01G0009950.1 Alkaloid CODM/T6ODM medium borderline
Ctin01G0014300.1 Alkaloid CODM/T6ODM medium borderline
Ctin01G0015360.1 Alkaloid CODM/T6ODM medium borderline
Ctin01G0019910.1 Alkaloid CODM/T6ODM medium borderline
Ctin01G0019920.1 Alkaloid CODM/T6ODM medium borderline
Ctin01G0019940.1 Alkaloid CODM/T6ODM medium borderline
Ctin01G0023650.1 Alkaloid CODM/T6ODM medium borderline
Ctin02G0000280.1 Alkaloid CODM/T6ODM medium borderline
Ctin02G0000280.2 Alkaloid CODM/T6ODM medium borderline
Ctin02G0006120.1 Alkaloid CODM/T6ODM medium borderline
Ctin03G0003840.1 Alkaloid CODM/T6ODM medium borderline
Ctin03G0003840.2 Alkaloid CODM/T6ODM medium borderline
Ctin03G0004880.5 Alkaloid CODM/T6ODM low borderline
Ctin03G0008810.1 Alkaloid CODM/T6ODM medium borderline
Ctin03G0008830.1 Alkaloid CODM/T6ODM medium borderline
Ctin03G0008860.1 Alkaloid CODM/T6ODM medium borderline
Ctin03G0018720.1 Alkaloid CODM/T6ODM medium borderline
Ctin03G0018740.1 Alkaloid CODM/T6ODM medium borderline
Ctin03G0018750.1 Alkaloid CODM/T6ODM medium borderline
Ctin03G0018760.1 Alkaloid CODM/T6ODM medium borderline
Ctin03G0018770.1 Alkaloid CODM/T6ODM medium borderline
Ctin03G0018790.1 Alkaloid CODM/T6ODM medium borderline
Ctin03G0028030.1 Alkaloid CODM/T6ODM medium borderline