PlantSME Plant secondary metabolism enzyme database

Chiococca alba (chiococca_alba)

Imported from atlas release summary for Chiococca alba.

2531
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 804 19 BAHD (329) View species results
Alkaloid pathway 614 25 7DLGT (110) View species results
Phenylpropanoid pathway 415 12 POD (166) View species results
Flavonoid pathway 325 11 UFGT (209) View species results
Rosmarinic acid pathway 208 7 C4H (90) View species results
Steroid pathway 165 16 CAS (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2546 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 508 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLH
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Gene Pathway Family Confidence Status
Calb4090233170.1 Alkaloid 7DLH medium borderline
Calb4090233180.1 Alkaloid 7DLH medium borderline
Calb4090233180.2 Alkaloid 7DLH medium borderline
Calb4090233190.1 Alkaloid 7DLH medium borderline
Calb4090233210.1 Alkaloid 7DLH medium borderline
Calb4430239440.1 Alkaloid 7DLH medium borderline
Calb4430239440.3 Alkaloid 7DLH medium borderline
Calb4430239450.2 Alkaloid 7DLH medium borderline
Calb4890248610.1 Alkaloid 7DLH low borderline
Calb547360264340.1 Alkaloid 7DLH medium borderline
Calb5500264480.1 Alkaloid 7DLH low borderline
Calb5500264480.2 Alkaloid 7DLH low borderline
Calb5630269130.1 Alkaloid 7DLH medium pass
Calb6090273480.1 Alkaloid 7DLH medium borderline
Calb6090273480.2 Alkaloid 7DLH medium borderline
Calb6090273480.3 Alkaloid 7DLH medium borderline
Calb6090273480.4 Alkaloid 7DLH medium borderline
Calb6090273480.5 Alkaloid 7DLH medium borderline
Calb6090273480.6 Alkaloid 7DLH medium borderline
Calb6090273480.7 Alkaloid 7DLH medium borderline
Calb6320277990.1 Alkaloid 7DLH medium borderline
Calb680590290500.1 Alkaloid 7DLH medium borderline
Calb680590290510.1 Alkaloid 7DLH medium borderline
Calb705030294860.1 Alkaloid 7DLH medium pass
Calb7150298450.1 Alkaloid 7DLH medium borderline
Calb718450299030.1 Alkaloid 7DLH medium borderline
Calb725320302130.1 Alkaloid 7DLH medium borderline
Calb725320302130.2 Alkaloid 7DLH medium borderline
Calb725320302130.3 Alkaloid 7DLH medium borderline
Calb725320302150.1 Alkaloid 7DLH medium borderline
Calb725320302160.1 Alkaloid 7DLH medium borderline
Calb737380304270.1 Alkaloid 7DLH medium borderline
Calb737650304370.1 Alkaloid 7DLH medium borderline
Calb753980308910.1 Alkaloid 7DLH medium borderline
Calb764740313450.1 Alkaloid 7DLH medium borderline
Calb764740313470.1 Alkaloid 7DLH medium borderline
Calb764740313540.1 Alkaloid 7DLH medium borderline
Calb764740313540.2 Alkaloid 7DLH medium borderline
Calb768000315780.1 Alkaloid 7DLH medium borderline