PlantSME Plant secondary metabolism enzyme database

Chiococca alba (chiococca_alba)

Imported from atlas release summary for Chiococca alba.

2531
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 804 19 BAHD (329) View species results
Alkaloid pathway 614 25 7DLGT (110) View species results
Phenylpropanoid pathway 415 12 POD (166) View species results
Flavonoid pathway 325 11 UFGT (209) View species results
Rosmarinic acid pathway 208 7 C4H (90) View species results
Steroid pathway 165 16 CAS (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2546 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 508 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: RAS
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Gene Pathway Family Confidence Status
Calb1540010660.1 Rosmarinic Acid RAS low borderline
Calb1540010660.2 Rosmarinic Acid RAS low borderline
Calb1550018030.1 Rosmarinic Acid RAS medium pass
Calb1550018590.1 Rosmarinic Acid RAS low borderline
Calb1870035250.1 Rosmarinic Acid RAS medium pass
Calb1870039400.1 Rosmarinic Acid RAS low borderline
Calb1880050080.1 Rosmarinic Acid RAS low borderline
Calb1900058370.1 Rosmarinic Acid RAS low borderline
Calb1900058370.2 Rosmarinic Acid RAS low borderline
Calb1910061170.1 Rosmarinic Acid RAS low borderline
Calb1910062160.1 Rosmarinic Acid RAS low borderline
Calb1910062160.2 Rosmarinic Acid RAS low borderline
Calb1920070470.1 Rosmarinic Acid RAS low borderline
Calb2280095550.1 Rosmarinic Acid RAS medium pass
Calb2380117490.1 Rosmarinic Acid RAS medium pass
Calb2450134190.1 Rosmarinic Acid RAS low borderline
Calb2450134330.1 Rosmarinic Acid RAS medium pass
Calb2450134350.1 Rosmarinic Acid RAS medium pass
Calb2580139770.1 Rosmarinic Acid RAS medium pass
Calb2580139920.1 Rosmarinic Acid RAS medium borderline
Calb2650153030.1 Rosmarinic Acid RAS medium pass
Calb2730167160.1 Rosmarinic Acid RAS low borderline
Calb3430206320.1 Rosmarinic Acid RAS low borderline
Calb3500212570.1 Rosmarinic Acid RAS low borderline
Calb3500212710.1 Rosmarinic Acid RAS medium pass
Calb3530217620.1 Rosmarinic Acid RAS low borderline
Calb3540219350.1 Rosmarinic Acid RAS medium pass
Calb3540219350.2 Rosmarinic Acid RAS medium pass
Calb3550221610.1 Rosmarinic Acid RAS medium pass
Calb5040252580.1 Rosmarinic Acid RAS low borderline
Calb5400262010.1 Rosmarinic Acid RAS low borderline
Calb5440262740.1 Rosmarinic Acid RAS medium pass
Calb5440262740.2 Rosmarinic Acid RAS medium pass
Calb5440262740.3 Rosmarinic Acid RAS medium pass
Calb6790289530.1 Rosmarinic Acid RAS low borderline
Calb768590316230.1 Rosmarinic Acid RAS medium pass
Calb772770322070.1 Rosmarinic Acid RAS medium pass
Calb776120331790.1 Rosmarinic Acid RAS low borderline
Calb776120331790.2 Rosmarinic Acid RAS low borderline
Calb780570346940.1 Rosmarinic Acid RAS low borderline