PlantSME Plant secondary metabolism enzyme database

Chiococca alba (chiococca_alba)

Imported from atlas release summary for Chiococca alba.

2531
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 804 19 BAHD (329) View species results
Alkaloid pathway 614 25 7DLGT (110) View species results
Phenylpropanoid pathway 415 12 POD (166) View species results
Flavonoid pathway 325 11 UFGT (209) View species results
Rosmarinic acid pathway 208 7 C4H (90) View species results
Steroid pathway 165 16 CAS (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2546 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 508 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PMT
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Gene Pathway Family Confidence Status
Calb1550018030.1 Alkaloid PMT low borderline
Calb1710027320.1 Alkaloid PMT medium pass
Calb1720028120.1 Alkaloid PMT medium pass
Calb1720028120.2 Alkaloid PMT medium pass
Calb1720028120.3 Alkaloid PMT medium pass
Calb1860033980.1 Alkaloid PMT medium borderline
Calb1860033980.2 Alkaloid PMT medium borderline
Calb1870039400.1 Alkaloid PMT low borderline
Calb1910061170.1 Alkaloid PMT medium pass
Calb2280095550.1 Alkaloid PMT low borderline
Calb2300101420.1 Alkaloid PMT low borderline
Calb2300101420.2 Alkaloid PMT low borderline
Calb2400123010.1 Alkaloid PMT low borderline
Calb2430129590.2 Alkaloid PMT low borderline
Calb2450132930.1 Alkaloid PMT low borderline
Calb2580139920.1 Alkaloid PMT low borderline
Calb2650149690.1 Alkaloid PMT medium borderline
Calb2650153030.1 Alkaloid PMT low borderline
Calb2650153110.1 Alkaloid PMT low borderline
Calb3430206320.1 Alkaloid PMT medium pass
Calb3500212570.1 Alkaloid PMT low borderline
Calb3500212710.1 Alkaloid PMT medium pass
Calb3540219350.1 Alkaloid PMT low borderline
Calb3540219350.2 Alkaloid PMT low borderline
Calb3550221420.1 Alkaloid PMT medium pass
Calb3550221420.2 Alkaloid PMT medium pass
Calb3580223920.1 Alkaloid PMT medium borderline
Calb4430239490.1 Alkaloid PMT medium pass
Calb4430239490.2 Alkaloid PMT medium pass
Calb4430239490.3 Alkaloid PMT low borderline
Calb5040252580.1 Alkaloid PMT low borderline
Calb5440262740.1 Alkaloid PMT low borderline
Calb5440262740.2 Alkaloid PMT low borderline
Calb5440262740.3 Alkaloid PMT low borderline
Calb5570266740.1 Alkaloid PMT low borderline
Calb693530293930.1 Alkaloid PMT medium pass