PlantSME Plant secondary metabolism enzyme database

Chiococca alba (chiococca_alba)

Imported from atlas release summary for Chiococca alba.

2531
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 804 19 BAHD (329) View species results
Alkaloid pathway 614 25 7DLGT (110) View species results
Phenylpropanoid pathway 415 12 POD (166) View species results
Flavonoid pathway 325 11 UFGT (209) View species results
Rosmarinic acid pathway 208 7 C4H (90) View species results
Steroid pathway 165 16 CAS (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2546 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 508 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
Calb1550019910.1 Alkaloid GS medium pass
Calb1550019920.1 Alkaloid GS medium pass
Calb1860031520.1 Alkaloid GS low borderline
Calb1860032650.1 Alkaloid GS medium pass
Calb1860032650.2 Alkaloid GS medium pass
Calb1860032650.3 Alkaloid GS medium pass
Calb1860032650.4 Alkaloid GS medium pass
Calb1870040360.1 Alkaloid GS low borderline
Calb1870040360.2 Alkaloid GS low borderline
Calb1870040370.1 Alkaloid GS low borderline
Calb1880047550.1 Alkaloid GS high pass
Calb1920071950.1 Alkaloid GS low borderline
Calb1930075840.1 Alkaloid GS low borderline
Calb2270088230.1 Alkaloid GS high pass
Calb2270088230.2 Alkaloid GS high pass
Calb2270090500.1 Alkaloid GS high pass
Calb2270090520.1 Alkaloid GS high pass
Calb2270090530.1 Alkaloid GS high pass
Calb2270090540.1 Alkaloid GS high pass
Calb2270090560.1 Alkaloid GS high pass
Calb2270090580.1 Alkaloid GS high pass
Calb2270090590.1 Alkaloid GS medium pass
Calb2270090600.1 Alkaloid GS medium pass
Calb2270090610.1 Alkaloid GS high pass
Calb2270090620.1 Alkaloid GS high pass
Calb2280092870.1 Alkaloid GS low borderline
Calb2280092870.2 Alkaloid GS low borderline
Calb2280092870.3 Alkaloid GS low borderline
Calb2300102410.1 Alkaloid GS high pass
Calb2320107300.1 Alkaloid GS low borderline
Calb2430128700.1 Alkaloid GS low borderline
Calb2450132640.1 Alkaloid GS low borderline
Calb2650151770.1 Alkaloid GS low borderline
Calb2650151780.1 Alkaloid GS low borderline
Calb3100177690.1 Alkaloid GS low borderline
Calb3100177690.2 Alkaloid GS low borderline
Calb3100177690.3 Alkaloid GS low borderline
Calb3220187620.1 Alkaloid GS medium pass
Calb3260192210.1 Alkaloid GS low borderline
Calb3390202650.1 Alkaloid GS medium pass
Calb3390202660.1 Alkaloid GS medium pass
Calb3390202660.2 Alkaloid GS medium pass
Calb3480211500.1 Alkaloid GS low borderline
Calb3520216150.1 Alkaloid GS high pass
Calb3530218750.1 Alkaloid GS low borderline
Calb3580222810.1 Alkaloid GS high pass
Calb5440262650.1 Alkaloid GS medium pass
Calb5760271080.1 Alkaloid GS high pass
Calb5760271090.1 Alkaloid GS high pass
Calb5760271090.2 Alkaloid GS high pass