PlantSME Plant secondary metabolism enzyme database

Chiococca alba (chiococca_alba)

Imported from atlas release summary for Chiococca alba.

2531
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 804 19 BAHD (329) View species results
Alkaloid pathway 614 25 7DLGT (110) View species results
Phenylpropanoid pathway 415 12 POD (166) View species results
Flavonoid pathway 325 11 UFGT (209) View species results
Rosmarinic acid pathway 208 7 C4H (90) View species results
Steroid pathway 165 16 CAS (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2546 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 508 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NCS
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Gene Pathway Family Confidence Status Best Target
Calb1240003000.1 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
Calb1540010360.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Calb1690026610.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Calb1690026610.2 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Calb1920071190.1 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
Calb1920071310.1 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
Calb1930077810.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Calb1940080220.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Calb1940083230.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Calb2280093670.1 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
Calb2280093690.1 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
Calb2290098360.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Calb2290098370.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Calb2370114770.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Calb2390118500.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Calb2390118500.2 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Calb2450133350.1 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
Calb2570137890.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Calb2580139610.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Calb2630146750.1 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
Calb2630146760.1 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
Calb2790171140.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Calb3190183700.1 Alkaloid NCS medium pass NCS__00002__sp_A2A1A1_NCS2_COPJA
Calb3190183710.1 Alkaloid NCS medium pass NCS__00002__sp_A2A1A1_NCS2_COPJA
Calb4970250160.1 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
Calb5020251470.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Calb5020251600.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Calb5570266830.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Calb6670285540.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Calb774380326430.1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA