PlantSME Plant secondary metabolism enzyme database

Chiococca alba (chiococca_alba)

Imported from atlas release summary for Chiococca alba.

2531
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 804 19 BAHD (329) View species results
Alkaloid pathway 614 25 7DLGT (110) View species results
Phenylpropanoid pathway 415 12 POD (166) View species results
Flavonoid pathway 325 11 UFGT (209) View species results
Rosmarinic acid pathway 208 7 C4H (90) View species results
Steroid pathway 165 16 CAS (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2546 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 508 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: ROT3/CYP90C1
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Gene Pathway Family Confidence Status
Calb1560021370.1 Steroid ROT3/CYP90C1 low borderline
Calb1570023140.1 Steroid ROT3/CYP90C1 low borderline
Calb1910062800.1 Steroid ROT3/CYP90C1 medium borderline
Calb2400123440.1 Steroid ROT3/CYP90C1 low borderline
Calb2410124410.1 Steroid ROT3/CYP90C1 low borderline
Calb2580138810.1 Steroid ROT3/CYP90C1 low borderline
Calb2580138860.1 Steroid ROT3/CYP90C1 medium pass
Calb2700164090.1 Steroid ROT3/CYP90C1 low borderline
Calb3280194620.1 Steroid ROT3/CYP90C1 medium borderline
Calb3470208760.1 Steroid ROT3/CYP90C1 low borderline
Calb3480211450.1 Steroid ROT3/CYP90C1 low borderline
Calb3500212440.1 Steroid ROT3/CYP90C1 low borderline
Calb3590226170.1 Steroid ROT3/CYP90C1 low borderline
Calb3830231400.1 Steroid ROT3/CYP90C1 medium borderline
Calb5150253930.1 Steroid ROT3/CYP90C1 low borderline
Calb5400261260.1 Steroid ROT3/CYP90C1 medium borderline
Calb6670285720.1 Steroid ROT3/CYP90C1 low borderline