PlantSME Plant secondary metabolism enzyme database

Chiococca alba (chiococca_alba)

Imported from atlas release summary for Chiococca alba.

2531
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 804 19 BAHD (329) View species results
Alkaloid pathway 614 25 7DLGT (110) View species results
Phenylpropanoid pathway 415 12 POD (166) View species results
Flavonoid pathway 325 11 UFGT (209) View species results
Rosmarinic acid pathway 208 7 C4H (90) View species results
Steroid pathway 165 16 CAS (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2546 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 508 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
Calb1202710001430.3 Flavonoid C4H medium borderline
Calb1870039610.1 Flavonoid C4H medium borderline
Calb1950085730.1 Flavonoid C4H low borderline
Calb3080176030.1 Flavonoid C4H medium borderline
Calb3380200350.1 Flavonoid C4H medium borderline
Calb3480208890.1 Flavonoid C4H medium borderline
Calb4420237230.1 Flavonoid C4H medium borderline
Calb4800246560.1 Flavonoid C4H medium borderline
Calb772630321450.1 Flavonoid C4H medium borderline
Calb776980337030.1 Flavonoid C4H low borderline
Calb1006030000030.1 Rosmarinic Acid C4H medium pass
Calb1006030000070.1 Rosmarinic Acid C4H low borderline
Calb1120590000790.1 Rosmarinic Acid C4H low borderline
Calb1120610000820.1 Rosmarinic Acid C4H low borderline
Calb1120610000830.1 Rosmarinic Acid C4H low borderline
Calb1120620000860.1 Rosmarinic Acid C4H low borderline
Calb1120620000860.2 Rosmarinic Acid C4H low borderline
Calb1152740001070.1 Rosmarinic Acid C4H low borderline
Calb1152760001130.1 Rosmarinic Acid C4H low borderline
Calb1202710001430.1 Rosmarinic Acid C4H low borderline
Calb1202710001430.2 Rosmarinic Acid C4H low borderline
Calb1202710001430.3 Rosmarinic Acid C4H low borderline
Calb1202710001440.1 Rosmarinic Acid C4H low borderline
Calb1240002480.1 Rosmarinic Acid C4H low borderline
Calb1306720005290.1 Rosmarinic Acid C4H low borderline
Calb1306720005290.2 Rosmarinic Acid C4H low borderline
Calb1306720005300.1 Rosmarinic Acid C4H low borderline
Calb1540011480.1 Rosmarinic Acid C4H low borderline
Calb1540014090.1 Rosmarinic Acid C4H low borderline
Calb1540014500.1 Rosmarinic Acid C4H medium pass
Calb1540014510.1 Rosmarinic Acid C4H medium pass
Calb1540014510.2 Rosmarinic Acid C4H low borderline
Calb1540016050.1 Rosmarinic Acid C4H low borderline
Calb1550017740.1 Rosmarinic Acid C4H low borderline
Calb1560021900.1 Rosmarinic Acid C4H low borderline
Calb1560021930.1 Rosmarinic Acid C4H medium pass
Calb1860030490.1 Rosmarinic Acid C4H low borderline
Calb1860032420.1 Rosmarinic Acid C4H low borderline
Calb1860032440.1 Rosmarinic Acid C4H low borderline
Calb1860033190.1 Rosmarinic Acid C4H low borderline
Calb1860033280.1 Rosmarinic Acid C4H low borderline
Calb1860033290.1 Rosmarinic Acid C4H low borderline
Calb1870037840.1 Rosmarinic Acid C4H low borderline
Calb1870039610.1 Rosmarinic Acid C4H medium pass
Calb1870039790.1 Rosmarinic Acid C4H low borderline
Calb1870040410.1 Rosmarinic Acid C4H medium pass
Calb1880047950.1 Rosmarinic Acid C4H low borderline
Calb1890050580.1 Rosmarinic Acid C4H low borderline
Calb1900058620.1 Rosmarinic Acid C4H low borderline
Calb1900058940.1 Rosmarinic Acid C4H medium pass