PlantSME Plant secondary metabolism enzyme database

Chiococca alba (chiococca_alba)

Imported from atlas release summary for Chiococca alba.

2531
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 804 19 BAHD (329) View species results
Alkaloid pathway 614 25 7DLGT (110) View species results
Phenylpropanoid pathway 415 12 POD (166) View species results
Flavonoid pathway 325 11 UFGT (209) View species results
Rosmarinic acid pathway 208 7 C4H (90) View species results
Steroid pathway 165 16 CAS (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2546 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 508 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
Reset
Gene Pathway Family Confidence Status
Calb1540014500.1 Alkaloid IO medium borderline
Calb1540014510.1 Alkaloid IO medium borderline
Calb1860030490.2 Alkaloid IO low borderline
Calb1860033280.1 Alkaloid IO medium borderline
Calb1890050580.1 Alkaloid IO medium borderline
Calb1900058620.1 Alkaloid IO medium borderline
Calb1900058620.2 Alkaloid IO low borderline
Calb1910063020.2 Alkaloid IO low borderline
Calb1930074710.1 Alkaloid IO medium borderline
Calb1930074840.1 Alkaloid IO medium borderline
Calb1930076160.1 Alkaloid IO medium borderline
Calb1940080990.1 Alkaloid IO medium borderline
Calb1940081000.1 Alkaloid IO medium borderline
Calb1950085740.1 Alkaloid IO medium borderline
Calb2340110460.1 Alkaloid IO medium borderline
Calb2350111470.1 Alkaloid IO medium borderline
Calb2370116500.1 Alkaloid IO medium borderline
Calb2370116680.1 Alkaloid IO medium borderline
Calb2420126470.1 Alkaloid IO medium borderline
Calb2420126480.1 Alkaloid IO medium borderline
Calb2430127370.1 Alkaloid IO medium borderline
Calb2580138810.1 Alkaloid IO low borderline
Calb2610144050.1 Alkaloid IO medium borderline
Calb2690163640.1 Alkaloid IO medium borderline
Calb2700164500.1 Alkaloid IO medium borderline
Calb3080176020.1 Alkaloid IO medium borderline
Calb3080176040.1 Alkaloid IO medium pass
Calb3180183540.1 Alkaloid IO medium borderline
Calb3220187560.1 Alkaloid IO low borderline
Calb3260190650.1 Alkaloid IO low borderline
Calb3300196410.1 Alkaloid IO medium borderline
Calb3470208490.1 Alkaloid IO medium borderline
Calb3520216980.1 Alkaloid IO low borderline
Calb3590225970.1 Alkaloid IO medium borderline
Calb3860231470.1 Alkaloid IO medium borderline
Calb3860231540.1 Alkaloid IO medium borderline
Calb4420237400.1 Alkaloid IO medium borderline
Calb4420237470.1 Alkaloid IO medium borderline
Calb4420237560.1 Alkaloid IO medium borderline
Calb4420238140.1 Alkaloid IO medium borderline
Calb4530241070.1 Alkaloid IO high pass
Calb4850247220.1 Alkaloid IO medium borderline
Calb6260277380.1 Alkaloid IO medium borderline
Calb6380280370.3 Alkaloid IO low borderline
Calb690170293390.1 Alkaloid IO medium borderline
Calb739150304620.1 Alkaloid IO medium borderline
Calb764960313580.1 Alkaloid IO medium borderline
Calb774680326620.1 Alkaloid IO medium borderline
Calb776980336040.1 Alkaloid IO medium borderline
Calb777730342360.1 Alkaloid IO low borderline