PlantSME Plant secondary metabolism enzyme database

Chiococca alba (chiococca_alba)

Imported from atlas release summary for Chiococca alba.

2531
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 804 19 BAHD (329) View species results
Alkaloid pathway 614 25 7DLGT (110) View species results
Phenylpropanoid pathway 415 12 POD (166) View species results
Flavonoid pathway 325 11 UFGT (209) View species results
Rosmarinic acid pathway 208 7 C4H (90) View species results
Steroid pathway 165 16 CAS (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2546 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 508 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP90D1
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Gene Pathway Family Confidence Status
Calb1540011480.1 Steroid CYP90D1 low borderline
Calb1550017740.1 Steroid CYP90D1 low borderline
Calb1570023470.1 Steroid CYP90D1 medium borderline
Calb1570023490.1 Steroid CYP90D1 medium borderline
Calb1860030490.1 Steroid CYP90D1 medium borderline
Calb1860030490.2 Steroid CYP90D1 medium borderline
Calb1890050580.1 Steroid CYP90D1 low borderline
Calb1910066090.1 Steroid CYP90D1 low borderline
Calb1930074840.1 Steroid CYP90D1 low borderline
Calb1930076240.1 Steroid CYP90D1 low borderline
Calb1940080990.1 Steroid CYP90D1 low borderline
Calb1950085800.1 Steroid CYP90D1 low borderline
Calb2280091450.1 Steroid CYP90D1 medium borderline
Calb2300099990.1 Steroid CYP90D1 medium borderline
Calb2300100810.1 Steroid CYP90D1 low borderline
Calb2300100820.1 Steroid CYP90D1 low borderline
Calb2340110420.1 Steroid CYP90D1 medium borderline
Calb2400121520.1 Steroid CYP90D1 low borderline
Calb2400123480.1 Steroid CYP90D1 medium borderline
Calb2420126250.1 Steroid CYP90D1 low borderline
Calb2420126260.1 Steroid CYP90D1 low borderline
Calb2420126310.1 Steroid CYP90D1 low borderline
Calb2420126320.1 Steroid CYP90D1 low borderline
Calb2420126480.1 Steroid CYP90D1 low borderline
Calb2580138800.1 Steroid CYP90D1 low borderline
Calb2590140930.1 Steroid CYP90D1 medium borderline
Calb2590140930.2 Steroid CYP90D1 medium borderline
Calb2590140930.3 Steroid CYP90D1 medium borderline
Calb2650152180.1 Steroid CYP90D1 low borderline
Calb2650153330.1 Steroid CYP90D1 medium borderline
Calb2700164500.1 Steroid CYP90D1 low borderline
Calb2700164530.1 Steroid CYP90D1 low borderline
Calb3180183540.1 Steroid CYP90D1 medium pass
Calb3180183550.1 Steroid CYP90D1 low borderline
Calb3210185660.1 Steroid CYP90D1 medium borderline
Calb3220187960.1 Steroid CYP90D1 low borderline
Calb3280194310.1 Steroid CYP90D1 low borderline
Calb3470208310.1 Steroid CYP90D1 low borderline
Calb3470208320.1 Steroid CYP90D1 low borderline
Calb3470208330.1 Steroid CYP90D1 low borderline
Calb3500213390.1 Steroid CYP90D1 medium borderline
Calb3590225970.1 Steroid CYP90D1 medium borderline
Calb3740230200.1 Steroid CYP90D1 low borderline
Calb3860231470.1 Steroid CYP90D1 low borderline
Calb3860231520.1 Steroid CYP90D1 low borderline
Calb3860231540.1 Steroid CYP90D1 low borderline
Calb3860231550.1 Steroid CYP90D1 low borderline
Calb4000232700.1 Steroid CYP90D1 medium borderline
Calb4000232700.2 Steroid CYP90D1 medium borderline
Calb4420237270.1 Steroid CYP90D1 low borderline