PlantSME Plant secondary metabolism enzyme database

Chiococca alba (chiococca_alba)

Imported from atlas release summary for Chiococca alba.

2531
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 804 19 BAHD (329) View species results
Alkaloid pathway 614 25 7DLGT (110) View species results
Phenylpropanoid pathway 415 12 POD (166) View species results
Flavonoid pathway 325 11 UFGT (209) View species results
Rosmarinic acid pathway 208 7 C4H (90) View species results
Steroid pathway 165 16 CAS (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2546 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 508 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
Calb2590140930.3 Rosmarinic Acid C4H low borderline
Calb2590142330.1 Rosmarinic Acid C4H low borderline
Calb2610144050.1 Rosmarinic Acid C4H low borderline
Calb2610144060.1 Rosmarinic Acid C4H medium pass
Calb2610144080.1 Rosmarinic Acid C4H medium pass
Calb2610145980.1 Rosmarinic Acid C4H low borderline
Calb2640148070.1 Rosmarinic Acid C4H low borderline
Calb2650150520.1 Rosmarinic Acid C4H low borderline
Calb2650151280.1 Rosmarinic Acid C4H low borderline
Calb2650151280.2 Rosmarinic Acid C4H low borderline
Calb2650152180.1 Rosmarinic Acid C4H low borderline
Calb2650153290.1 Rosmarinic Acid C4H low borderline
Calb2650153330.1 Rosmarinic Acid C4H low borderline
Calb2650155850.1 Rosmarinic Acid C4H low borderline
Calb2650156080.1 Rosmarinic Acid C4H low borderline
Calb2650158680.1 Rosmarinic Acid C4H low borderline
Calb2650158730.1 Rosmarinic Acid C4H low borderline
Calb2650158730.2 Rosmarinic Acid C4H medium pass
Calb2670161160.1 Rosmarinic Acid C4H medium pass
Calb2690163640.1 Rosmarinic Acid C4H medium pass
Calb2700164080.1 Rosmarinic Acid C4H low borderline
Calb2700164500.1 Rosmarinic Acid C4H low borderline
Calb2700164510.1 Rosmarinic Acid C4H medium pass
Calb2700164530.1 Rosmarinic Acid C4H low borderline
Calb2700164540.1 Rosmarinic Acid C4H medium pass
Calb2700164570.1 Rosmarinic Acid C4H low borderline
Calb2770169910.1 Rosmarinic Acid C4H medium pass
Calb2790170920.1 Rosmarinic Acid C4H medium pass
Calb2790170920.2 Rosmarinic Acid C4H medium pass
Calb2790172570.1 Rosmarinic Acid C4H low borderline
Calb2790172580.1 Rosmarinic Acid C4H medium pass
Calb2790172590.1 Rosmarinic Acid C4H low borderline
Calb2790172600.1 Rosmarinic Acid C4H medium pass
Calb2790172610.1 Rosmarinic Acid C4H low borderline
Calb3080176020.1 Rosmarinic Acid C4H low borderline
Calb3080176030.1 Rosmarinic Acid C4H low borderline
Calb3080176040.1 Rosmarinic Acid C4H low borderline
Calb3100178230.2 Rosmarinic Acid C4H low borderline
Calb3130180100.1 Rosmarinic Acid C4H low borderline
Calb3170182990.1 Rosmarinic Acid C4H low borderline
Calb3180183540.1 Rosmarinic Acid C4H medium pass
Calb3180183550.1 Rosmarinic Acid C4H low borderline
Calb3180183590.1 Rosmarinic Acid C4H low borderline
Calb3210185670.1 Rosmarinic Acid C4H low borderline
Calb3220187570.1 Rosmarinic Acid C4H low borderline
Calb3220187580.1 Rosmarinic Acid C4H medium pass
Calb3220187960.1 Rosmarinic Acid C4H low borderline
Calb3220187970.1 Rosmarinic Acid C4H low borderline
Calb3280194310.1 Rosmarinic Acid C4H low borderline
Calb3280194620.1 Rosmarinic Acid C4H low borderline