PlantSME Plant secondary metabolism enzyme database

Chiococca alba (chiococca_alba)

Imported from atlas release summary for Chiococca alba.

2531
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 31.77% Alkaloid pathway 24.26% Phenylpropanoid pathway 16.4% Flavonoid pathway 12.84% Rosmarinic acid pathway 8.22% Steroid pathway 6.52%
Family Distribution
C4H 6.47% BAHD 6.34% C3'H/CYP98A 5.91% UGT 4.38% IFS 4.08% 7DLGT 3.81% UFGT 3.68% CYP76 3.33%
Other Families 62.0%
More Families (96)
4CL 204 3.16% POD 194 3.0% T3O 193 2.99% F3H 174 2.69% STR 152 2.35% NMT 152 2.35% DWF4/CYP90B1 151 2.34% BR6OX2/CYP85A2 134 2.07% F3'H/CYP75B 133 2.06% H6H 105 1.62% CAD 101 1.56% CYP71 97 1.5% TRI/TRII 90 1.39% CODM/T6ODM 90 1.39% 7DLH 89 1.38% SMT1/SMT2/SMT3 88 1.36% TPS 72 1.11% IFR 71 1.1% GES 70 1.08% CAS 69 1.07% SGD 64 0.99% GS 61 0.94% CYP90D1 61 0.94% HCT 58 0.9% LAC 54 0.84% TAT 53 0.82% SLS 52 0.8% IO 50 0.77% FNS 50 0.77% CSE 49 0.76% T16H 48 0.74% PYKS 46 0.71% G8O/G8H 45 0.7% BBE 43 0.67% RAS 40 0.62% CPD/CYP90A1 40 0.62% PMT 36 0.56% CYP51G1 34 0.53% F5H/CYP84A 33 0.51% BR6OX1/CYP85A1 32 0.5% NCS 30 0.46% ANR 29 0.45% PAL 27 0.42% COMT 27 0.42% F3'5'H/CYP75A 26 0.4% CNMT 24 0.37% CCR 23 0.36% LAMT 21 0.32% 8HGO 20 0.31% ANS/LDOX 19 0.29% CHS 19 0.29% FPPS 18 0.28% GGPPS 18 0.28% ROT3/CYP90C1 17 0.26% 16OMT 16 0.25% CYP80B1 16 0.25% COR 16 0.25% MPO 15 0.23% ISY 14 0.22% CYP719 14 0.22% DET2 14 0.22% SMO1/SMO2 14 0.22% DXS 14 0.22% HMGR 14 0.22% CHI 13 0.2% DFR 13 0.2% HPPR 11 0.17% CMK/IspE 11 0.17% SQS/FDFT1 10 0.15% CPR 9 0.14% AACT 9 0.14% 6OMT_4OMT_SOMT 8 0.12% SQE 7 0.11% MVK 7 0.11% TYDC_DDC 6 0.09% TDC 6 0.09% FLS 6 0.09% CCoAOMT 6 0.09% DWF1 6 0.09% MVD 5 0.08% DWF7 4 0.06% HDR/IspH 3 0.05% HMGS 3 0.05% ADC 2 0.03% CYP80F1 2 0.03% FK 2 0.03% DWF5 2 0.03% HYD1 2 0.03% CPI1 2 0.03% MCT/IspD 2 0.03% IDI 2 0.03% ODC 1 0.02% HDS/IspG 1 0.02% DXR 1 0.02% MDS/IspF 1 0.02% PMK 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 804 19 BAHD (329) View species results
Alkaloid pathway 614 25 7DLGT (110) View species results
Phenylpropanoid pathway 415 12 POD (166) View species results
Flavonoid pathway 325 11 UFGT (209) View species results
Rosmarinic acid pathway 208 7 C4H (90) View species results
Steroid pathway 165 16 CAS (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2546 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 508 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAS
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Gene Pathway Family Confidence Status Best Target
Calb5760270820.1 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Calb5760270820.2 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Calb664420285040.1 Steroid CAS medium pass CAS__00011__sp_Q8W3Z4_CAS1_BETPL
Calb6670285320.1 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Calb6670285350.1 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Calb6940293950.1 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Calb708830296990.1 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Calb714120297800.1 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Calb742220305340.1 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Calb745740306270.1 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Calb756610309530.1 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Calb770630318350.1 Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
Calb770630318360.1 Steroid CAS medium pass CAS__00005__sp_P38605_CAS1_ARATH
Calb776810335080.1 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Calb778440344240.1 Steroid CAS medium pass CAS__00005__sp_P38605_CAS1_ARATH
Calb779890345220.1 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Calb780210345730.1 Steroid CAS medium pass CAS__00009__sp_Q6Z2X6_CAS_ORYSJ
Calb780210345730.2 Steroid CAS medium pass CAS__00009__sp_Q6Z2X6_CAS_ORYSJ
Calb780210345730.3 Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL