PlantSME Plant secondary metabolism enzyme database

Chiococca alba (chiococca_alba)

Imported from atlas release summary for Chiococca alba.

2531
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 804 19 BAHD (329) View species results
Alkaloid pathway 614 25 7DLGT (110) View species results
Phenylpropanoid pathway 415 12 POD (166) View species results
Flavonoid pathway 325 11 UFGT (209) View species results
Rosmarinic acid pathway 208 7 C4H (90) View species results
Steroid pathway 165 16 CAS (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2546 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 508 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
Calb3260190840.1 Flavonoid F3H medium borderline
Calb3280193850.1 Flavonoid F3H low borderline
Calb3280193860.1 Flavonoid F3H low borderline
Calb3280193870.1 Flavonoid F3H low borderline
Calb3280194200.1 Flavonoid F3H medium borderline
Calb3290195770.1 Flavonoid F3H medium borderline
Calb3290195780.1 Flavonoid F3H medium borderline
Calb3460207330.1 Flavonoid F3H medium pass
Calb3510214760.1 Flavonoid F3H medium borderline
Calb3520215620.1 Flavonoid F3H low borderline
Calb3520216860.1 Flavonoid F3H medium borderline
Calb3520216870.1 Flavonoid F3H medium borderline
Calb3540218940.1 Flavonoid F3H low borderline
Calb3540218940.2 Flavonoid F3H low borderline
Calb3540219980.1 Flavonoid F3H medium borderline
Calb3730229530.1 Flavonoid F3H medium borderline
Calb3730229540.1 Flavonoid F3H medium borderline
Calb3730229550.1 Flavonoid F3H medium borderline
Calb3730229560.1 Flavonoid F3H medium borderline
Calb3730229560.2 Flavonoid F3H medium borderline
Calb3860231570.1 Flavonoid F3H low borderline
Calb3860231570.2 Flavonoid F3H low borderline
Calb4350235230.1 Flavonoid F3H low borderline
Calb4380236570.1 Flavonoid F3H medium borderline
Calb4520240920.1 Flavonoid F3H medium borderline
Calb4660244300.1 Flavonoid F3H low borderline
Calb5010251290.1 Flavonoid F3H low borderline
Calb5020251470.1 Flavonoid F3H low borderline
Calb5020251520.1 Flavonoid F3H medium borderline
Calb5020251520.2 Flavonoid F3H medium borderline
Calb5020251580.1 Flavonoid F3H medium pass
Calb5020251620.1 Flavonoid F3H medium borderline
Calb5020251630.1 Flavonoid F3H medium borderline
Calb5020251650.1 Flavonoid F3H medium pass
Calb5020251660.1 Flavonoid F3H medium borderline
Calb5020251670.1 Flavonoid F3H medium borderline
Calb5020251680.1 Flavonoid F3H medium borderline
Calb5020251700.1 Flavonoid F3H medium borderline
Calb5020251710.1 Flavonoid F3H medium borderline
Calb5020251720.1 Flavonoid F3H medium borderline
Calb5180254390.1 Flavonoid F3H medium pass
Calb5180255760.1 Flavonoid F3H medium borderline
Calb5180255760.2 Flavonoid F3H medium borderline
Calb5570266830.1 Flavonoid F3H medium borderline
Calb5800271570.1 Flavonoid F3H medium borderline
Calb6670285530.1 Flavonoid F3H medium borderline
Calb6670285540.1 Flavonoid F3H low borderline
Calb6670286260.1 Flavonoid F3H medium borderline
Calb678160288430.1 Flavonoid F3H medium pass
Calb679860290410.1 Flavonoid F3H medium borderline