PlantSME Plant secondary metabolism enzyme database

Chiococca alba (chiococca_alba)

Imported from atlas release summary for Chiococca alba.

2531
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 804 19 BAHD (329) View species results
Alkaloid pathway 614 25 7DLGT (110) View species results
Phenylpropanoid pathway 415 12 POD (166) View species results
Flavonoid pathway 325 11 UFGT (209) View species results
Rosmarinic acid pathway 208 7 C4H (90) View species results
Steroid pathway 165 16 CAS (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2546 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 508 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Calb2790171770.1 Alkaloid T3O low borderline
Calb2790171770.2 Alkaloid T3O low borderline
Calb2790172570.1 Alkaloid T3O medium borderline
Calb2790172580.1 Alkaloid T3O medium borderline
Calb2790172600.1 Alkaloid T3O medium borderline
Calb3100178230.1 Alkaloid T3O medium pass
Calb3100178230.2 Alkaloid T3O medium pass
Calb3130180100.1 Alkaloid T3O medium borderline
Calb3170182990.1 Alkaloid T3O medium borderline
Calb3210185670.1 Alkaloid T3O medium pass
Calb3220187580.1 Alkaloid T3O medium borderline
Calb3220187960.1 Alkaloid T3O medium borderline
Calb3220187970.1 Alkaloid T3O medium borderline
Calb3280194130.1 Alkaloid T3O low borderline
Calb3410204540.1 Alkaloid T3O low borderline
Calb3430206480.1 Alkaloid T3O medium pass
Calb3470208310.1 Alkaloid T3O medium borderline
Calb3470208320.1 Alkaloid T3O medium borderline
Calb3470208330.1 Alkaloid T3O medium borderline
Calb3470208370.1 Alkaloid T3O medium borderline
Calb3470208770.1 Alkaloid T3O medium pass
Calb3480211440.1 Alkaloid T3O medium pass
Calb3500212350.1 Alkaloid T3O medium pass
Calb3500212640.1 Alkaloid T3O medium borderline
Calb3500212650.1 Alkaloid T3O medium borderline
Calb3500213360.1 Alkaloid T3O medium pass
Calb3520216990.1 Alkaloid T3O low borderline
Calb3560221850.1 Alkaloid T3O low borderline
Calb3740230200.1 Alkaloid T3O medium borderline
Calb3740230220.1 Alkaloid T3O medium borderline
Calb3740230230.1 Alkaloid T3O medium borderline
Calb3740230260.1 Alkaloid T3O medium borderline
Calb3740230260.2 Alkaloid T3O medium borderline
Calb3740230310.1 Alkaloid T3O medium borderline
Calb4000232700.1 Alkaloid T3O medium pass
Calb4350235130.1 Alkaloid T3O medium borderline
Calb4350235140.1 Alkaloid T3O medium borderline
Calb4420237220.1 Alkaloid T3O medium borderline
Calb4420237270.1 Alkaloid T3O medium borderline
Calb4420237420.1 Alkaloid T3O medium borderline
Calb4430238290.1 Alkaloid T3O medium pass
Calb4430238290.2 Alkaloid T3O low borderline
Calb4430238970.1 Alkaloid T3O medium borderline
Calb4430239010.1 Alkaloid T3O medium borderline
Calb4430239020.1 Alkaloid T3O medium borderline
Calb4510240740.1 Alkaloid T3O medium borderline
Calb4660244480.1 Alkaloid T3O medium borderline
Calb4890248090.1 Alkaloid T3O medium borderline
Calb5400261260.1 Alkaloid T3O medium pass
Calb5400261380.1 Alkaloid T3O medium borderline