Chiococca alba (chiococca_alba)
Imported from atlas release summary for Chiococca alba.
3134
Candidate Protein Records
2531
Pathway-Level Records
6463
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
6463
Family-Level Calls
C4H
6.47%
BAHD
6.34%
C3'H/CYP98A
5.91%
UGT
4.38%
IFS
4.08%
7DLGT
3.81%
UFGT
3.68%
CYP76
3.33%
Other Families
62.0%
More Families (96)
4CL
204
3.16%
POD
194
3.0%
T3O
193
2.99%
F3H
174
2.69%
STR
152
2.35%
NMT
152
2.35%
DWF4/CYP90B1
151
2.34%
BR6OX2/CYP85A2
134
2.07%
F3'H/CYP75B
133
2.06%
H6H
105
1.62%
CAD
101
1.56%
CYP71
97
1.5%
TRI/TRII
90
1.39%
CODM/T6ODM
90
1.39%
7DLH
89
1.38%
SMT1/SMT2/SMT3
88
1.36%
TPS
72
1.11%
IFR
71
1.1%
GES
70
1.08%
CAS
69
1.07%
SGD
64
0.99%
GS
61
0.94%
CYP90D1
61
0.94%
HCT
58
0.9%
LAC
54
0.84%
TAT
53
0.82%
SLS
52
0.8%
IO
50
0.77%
FNS
50
0.77%
CSE
49
0.76%
T16H
48
0.74%
PYKS
46
0.71%
G8O/G8H
45
0.7%
BBE
43
0.67%
RAS
40
0.62%
CPD/CYP90A1
40
0.62%
PMT
36
0.56%
CYP51G1
34
0.53%
F5H/CYP84A
33
0.51%
BR6OX1/CYP85A1
32
0.5%
NCS
30
0.46%
ANR
29
0.45%
PAL
27
0.42%
COMT
27
0.42%
F3'5'H/CYP75A
26
0.4%
CNMT
24
0.37%
CCR
23
0.36%
LAMT
21
0.32%
8HGO
20
0.31%
ANS/LDOX
19
0.29%
CHS
19
0.29%
FPPS
18
0.28%
GGPPS
18
0.28%
ROT3/CYP90C1
17
0.26%
16OMT
16
0.25%
CYP80B1
16
0.25%
COR
16
0.25%
MPO
15
0.23%
ISY
14
0.22%
CYP719
14
0.22%
DET2
14
0.22%
SMO1/SMO2
14
0.22%
DXS
14
0.22%
HMGR
14
0.22%
CHI
13
0.2%
DFR
13
0.2%
HPPR
11
0.17%
CMK/IspE
11
0.17%
SQS/FDFT1
10
0.15%
CPR
9
0.14%
AACT
9
0.14%
6OMT_4OMT_SOMT
8
0.12%
SQE
7
0.11%
MVK
7
0.11%
TYDC_DDC
6
0.09%
TDC
6
0.09%
FLS
6
0.09%
CCoAOMT
6
0.09%
DWF1
6
0.09%
MVD
5
0.08%
DWF7
4
0.06%
HDR/IspH
3
0.05%
HMGS
3
0.05%
ADC
2
0.03%
CYP80F1
2
0.03%
FK
2
0.03%
DWF5
2
0.03%
HYD1
2
0.03%
CPI1
2
0.03%
MCT/IspD
2
0.03%
IDI
2
0.03%
ODC
1
0.02%
HDS/IspG
1
0.02%
DXR
1
0.02%
MDS/IspF
1
0.02%
PMK
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 804 | 19 | BAHD (329) | View species results |
| Alkaloid pathway | 614 | 25 | 7DLGT (110) | View species results |
| Phenylpropanoid pathway | 415 | 12 | POD (166) | View species results |
| Flavonoid pathway | 325 | 11 | UFGT (209) | View species results |
| Rosmarinic acid pathway | 208 | 7 | C4H (90) | View species results |
| Steroid pathway | 165 | 16 | CAS (60) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2546 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 508 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Calb3480209280.1 | Alkaloid | SGD | medium | pass |
| Calb3480210240.1 | Alkaloid | SGD | medium | pass |
| Calb3480210240.2 | Alkaloid | SGD | medium | pass |
| Calb3480210250.1 | Alkaloid | SGD | medium | pass |
| Calb3480210250.2 | Alkaloid | SGD | medium | pass |
| Calb3480210250.3 | Alkaloid | SGD | medium | pass |
| Calb3480210260.1 | Alkaloid | SGD | medium | pass |
| Calb3480210270.1 | Alkaloid | SGD | medium | pass |
| Calb3480210820.1 | Alkaloid | SGD | medium | pass |
| Calb3480210820.2 | Alkaloid | SGD | medium | pass |
| Calb3480210820.3 | Alkaloid | SGD | medium | pass |
| Calb3480210820.4 | Alkaloid | SGD | medium | pass |
| Calb3480210820.5 | Alkaloid | SGD | medium | pass |
| Calb3480210820.6 | Alkaloid | SGD | medium | pass |
| Calb3480210820.7 | Alkaloid | SGD | medium | pass |
| Calb3480210820.8 | Alkaloid | SGD | medium | pass |
| Calb4300234270.1 | Alkaloid | SGD | medium | pass |
| Calb4300234270.2 | Alkaloid | SGD | medium | pass |
| Calb4300234280.1 | Alkaloid | SGD | medium | pass |
| Calb4300234290.1 | Alkaloid | SGD | medium | pass |
| Calb4300234300.1 | Alkaloid | SGD | medium | pass |
| Calb4300234310.1 | Alkaloid | SGD | medium | pass |
| Calb4300234600.1 | Alkaloid | SGD | low | borderline |
| Calb4990250540.1 | Alkaloid | SGD | medium | pass |
| Calb4990250540.2 | Alkaloid | SGD | medium | pass |
| Calb5180254400.1 | Alkaloid | SGD | low | borderline |
| Calb5180254400.2 | Alkaloid | SGD | low | borderline |
| Calb6670285670.1 | Alkaloid | SGD | medium | pass |
| Calb6670285680.1 | Alkaloid | SGD | medium | pass |
| Calb6670285680.2 | Alkaloid | SGD | medium | pass |
| Calb675270288070.1 | Alkaloid | SGD | medium | pass |
| Calb686400292120.1 | Alkaloid | SGD | medium | pass |
| Calb7080295660.1 | Alkaloid | SGD | medium | pass |
| Calb728760302770.1 | Alkaloid | SGD | medium | pass |
| Calb728760302790.1 | Alkaloid | SGD | medium | pass |
| Calb728760302790.2 | Alkaloid | SGD | medium | pass |
| Calb760450311340.1 | Alkaloid | SGD | medium | pass |
| Calb771530319500.1 | Alkaloid | SGD | medium | pass |
| Calb771530319530.1 | Alkaloid | SGD | medium | pass |
| Calb771710320150.1 | Alkaloid | SGD | medium | pass |
| Calb774170325870.1 | Alkaloid | SGD | medium | pass |
| Calb775590328740.1 | Alkaloid | SGD | low | borderline |
| Calb777150338810.1 | Alkaloid | SGD | low | borderline |
| Calb777730342150.1 | Alkaloid | SGD | medium | pass |
| Calb780310346330.1 | Alkaloid | SGD | medium | pass |
| Calb795340347710.1 | Alkaloid | SGD | medium | pass |
| Calb1120610000810.1 | Alkaloid | SLS | medium | borderline |
| Calb1151690000990.1 | Alkaloid | SLS | medium | borderline |
| Calb1152740001070.1 | Alkaloid | SLS | medium | borderline |
| Calb1152760001130.1 | Alkaloid | SLS | medium | borderline |