PlantSME Plant secondary metabolism enzyme database

Chiococca alba (chiococca_alba)

Imported from atlas release summary for Chiococca alba.

2531
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 804 19 BAHD (329) View species results
Alkaloid pathway 614 25 7DLGT (110) View species results
Phenylpropanoid pathway 415 12 POD (166) View species results
Flavonoid pathway 325 11 UFGT (209) View species results
Rosmarinic acid pathway 208 7 C4H (90) View species results
Steroid pathway 165 16 CAS (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2546 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 508 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Calb3140180600.1 Alkaloid 7DLGT medium pass
Calb3140180610.1 Alkaloid 7DLGT low borderline
Calb3160181940.1 Alkaloid 7DLGT high pass
Calb3160182390.1 Alkaloid 7DLGT low borderline
Calb3220186340.1 Alkaloid 7DLGT medium pass
Calb3250189650.1 Alkaloid 7DLGT low borderline
Calb3250189660.1 Alkaloid 7DLGT medium pass
Calb3250189670.1 Alkaloid 7DLGT low borderline
Calb3260192190.1 Alkaloid 7DLGT low borderline
Calb3260192730.1 Alkaloid 7DLGT high pass
Calb3380200880.1 Alkaloid 7DLGT low borderline
Calb3520216120.1 Alkaloid 7DLGT low borderline
Calb3520216310.1 Alkaloid 7DLGT low borderline
Calb3580224000.1 Alkaloid 7DLGT low borderline
Calb3580224180.1 Alkaloid 7DLGT low borderline
Calb3580224180.2 Alkaloid 7DLGT low borderline
Calb3710228790.1 Alkaloid 7DLGT low borderline
Calb3710228800.1 Alkaloid 7DLGT low borderline
Calb3940231930.1 Alkaloid 7DLGT low borderline
Calb3940232000.1 Alkaloid 7DLGT low borderline
Calb4000232610.1 Alkaloid 7DLGT low borderline
Calb430740234940.1 Alkaloid 7DLGT medium pass
Calb4420237190.1 Alkaloid 7DLGT low borderline
Calb4420237260.1 Alkaloid 7DLGT medium pass
Calb4420237300.1 Alkaloid 7DLGT low borderline
Calb4420237310.1 Alkaloid 7DLGT high pass
Calb4420237370.1 Alkaloid 7DLGT medium pass
Calb4420237490.1 Alkaloid 7DLGT medium pass
Calb4420237510.1 Alkaloid 7DLGT medium pass
Calb4420237600.1 Alkaloid 7DLGT low borderline
Calb4420237610.1 Alkaloid 7DLGT medium pass
Calb4420237620.1 Alkaloid 7DLGT medium pass
Calb4540241470.1 Alkaloid 7DLGT medium pass
Calb4540241480.1 Alkaloid 7DLGT medium pass
Calb4570242170.1 Alkaloid 7DLGT low borderline
Calb4570242180.1 Alkaloid 7DLGT low borderline
Calb4640243320.1 Alkaloid 7DLGT medium pass
Calb4640243320.2 Alkaloid 7DLGT medium pass
Calb4640243320.3 Alkaloid 7DLGT medium pass
Calb4800246610.1 Alkaloid 7DLGT low borderline
Calb5180255390.1 Alkaloid 7DLGT low borderline
Calb5240258240.1 Alkaloid 7DLGT low borderline
Calb5450263560.1 Alkaloid 7DLGT medium pass
Calb5500265090.1 Alkaloid 7DLGT medium pass
Calb5500265130.1 Alkaloid 7DLGT low borderline
Calb5500265140.1 Alkaloid 7DLGT low borderline
Calb5760271200.1 Alkaloid 7DLGT low borderline
Calb5760271210.1 Alkaloid 7DLGT low borderline
Calb5760271230.1 Alkaloid 7DLGT low borderline
Calb5760271240.1 Alkaloid 7DLGT low borderline