PlantSME Plant secondary metabolism enzyme database

Chiococca alba (chiococca_alba)

Imported from atlas release summary for Chiococca alba.

2531
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 804 19 BAHD (329) View species results
Alkaloid pathway 614 25 7DLGT (110) View species results
Phenylpropanoid pathway 415 12 POD (166) View species results
Flavonoid pathway 325 11 UFGT (209) View species results
Rosmarinic acid pathway 208 7 C4H (90) View species results
Steroid pathway 165 16 CAS (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2546 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 508 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Calb2270088870.1 Rosmarinic Acid C4H low borderline
Calb2270088880.1 Rosmarinic Acid C4H low borderline
Calb2270088890.1 Rosmarinic Acid C4H medium pass
Calb2270088900.1 Rosmarinic Acid C4H low borderline
Calb2270088910.1 Rosmarinic Acid C4H medium pass
Calb2270088920.1 Rosmarinic Acid C4H low borderline
Calb2280090840.1 Rosmarinic Acid C4H low borderline
Calb2280090850.1 Rosmarinic Acid C4H low borderline
Calb2280091450.1 Rosmarinic Acid C4H low borderline
Calb2280092070.1 Rosmarinic Acid C4H low borderline
Calb2300099990.1 Rosmarinic Acid C4H low borderline
Calb2300100350.1 Rosmarinic Acid C4H low borderline
Calb2300100370.1 Rosmarinic Acid C4H medium pass
Calb2300100800.1 Rosmarinic Acid C4H low borderline
Calb2310102820.1 Rosmarinic Acid C4H medium pass
Calb2310103830.1 Rosmarinic Acid C4H medium pass
Calb2310103850.1 Rosmarinic Acid C4H low borderline
Calb2320106880.1 Rosmarinic Acid C4H medium pass
Calb2340110460.1 Rosmarinic Acid C4H medium pass
Calb2340110470.1 Rosmarinic Acid C4H low borderline
Calb2340111140.1 Rosmarinic Acid C4H low borderline
Calb2340111160.1 Rosmarinic Acid C4H low borderline
Calb2350111470.1 Rosmarinic Acid C4H low borderline
Calb2360111770.1 Rosmarinic Acid C4H low borderline
Calb2360113430.1 Rosmarinic Acid C4H medium pass
Calb2360113460.1 Rosmarinic Acid C4H low borderline
Calb2360113480.1 Rosmarinic Acid C4H low borderline
Calb2360113490.1 Rosmarinic Acid C4H medium pass
Calb2370116490.1 Rosmarinic Acid C4H low borderline
Calb2370116500.1 Rosmarinic Acid C4H medium pass
Calb2370116530.1 Rosmarinic Acid C4H low borderline
Calb2370116540.1 Rosmarinic Acid C4H low borderline
Calb2370116550.1 Rosmarinic Acid C4H low borderline
Calb2370116560.1 Rosmarinic Acid C4H medium pass
Calb2370116680.1 Rosmarinic Acid C4H low borderline
Calb2390118690.1 Rosmarinic Acid C4H low borderline
Calb2390118760.1 Rosmarinic Acid C4H low borderline
Calb2400120260.1 Rosmarinic Acid C4H low borderline
Calb2400121470.1 Rosmarinic Acid C4H low borderline
Calb2400121520.1 Rosmarinic Acid C4H low borderline
Calb2400121560.1 Rosmarinic Acid C4H low borderline
Calb2400123470.1 Rosmarinic Acid C4H low borderline
Calb2420124870.1 Rosmarinic Acid C4H low borderline
Calb2420125510.1 Rosmarinic Acid C4H low borderline
Calb2420126250.1 Rosmarinic Acid C4H medium pass
Calb2420126260.1 Rosmarinic Acid C4H low borderline
Calb2420126290.1 Rosmarinic Acid C4H low borderline
Calb2420126300.1 Rosmarinic Acid C4H medium pass
Calb2420126310.1 Rosmarinic Acid C4H medium pass
Calb2420126320.1 Rosmarinic Acid C4H medium pass