PlantSME Plant secondary metabolism enzyme database

Chiococca alba (chiococca_alba)

Imported from atlas release summary for Chiococca alba.

2531
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 804 19 BAHD (329) View species results
Alkaloid pathway 614 25 7DLGT (110) View species results
Phenylpropanoid pathway 415 12 POD (166) View species results
Flavonoid pathway 325 11 UFGT (209) View species results
Rosmarinic acid pathway 208 7 C4H (90) View species results
Steroid pathway 165 16 CAS (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2546 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 508 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Calb773910323290.1 Alkaloid 7DLGT medium pass
Calb773910323310.1 Alkaloid 7DLGT medium pass
Calb773910323320.1 Alkaloid 7DLGT medium pass
Calb773910323320.2 Alkaloid 7DLGT medium pass
Calb774020324110.1 Alkaloid 7DLGT medium pass
Calb774020324130.1 Alkaloid 7DLGT medium pass
Calb774020324150.1 Alkaloid 7DLGT medium pass
Calb774020324160.1 Alkaloid 7DLGT high pass
Calb774360326420.1 Alkaloid 7DLGT low borderline
Calb774870327320.1 Alkaloid 7DLGT low borderline
Calb777010338280.1 Alkaloid 7DLGT high pass
Calb777440341170.1 Alkaloid 7DLGT medium pass
Calb777730343590.1 Alkaloid 7DLGT low borderline
Calb777730343660.1 Alkaloid 7DLGT low borderline
Calb778000343790.1 Alkaloid 7DLGT medium pass
Calb778000343810.1 Alkaloid 7DLGT low borderline
Calb778500344360.1 Alkaloid 7DLGT low borderline
Calb778510344410.1 Alkaloid 7DLGT low borderline
Calb778510344410.2 Alkaloid 7DLGT low borderline
Calb900910348320.1 Alkaloid 7DLGT medium pass
Calb1120590000790.1 Alkaloid 7DLH medium borderline
Calb1120590000800.1 Alkaloid 7DLH medium borderline
Calb1120590000800.2 Alkaloid 7DLH medium borderline
Calb1120610000820.1 Alkaloid 7DLH medium borderline
Calb1120610000830.1 Alkaloid 7DLH medium borderline
Calb1120620000860.1 Alkaloid 7DLH medium borderline
Calb1120620000860.2 Alkaloid 7DLH medium borderline
Calb1120620000870.1 Alkaloid 7DLH medium borderline
Calb1151690001000.1 Alkaloid 7DLH medium borderline
Calb1152740001070.2 Alkaloid 7DLH medium borderline
Calb1202710001430.1 Alkaloid 7DLH medium borderline
Calb1202710001430.2 Alkaloid 7DLH medium borderline
Calb1202710001430.3 Alkaloid 7DLH medium borderline
Calb1540014090.1 Alkaloid 7DLH medium borderline
Calb1540014780.2 Alkaloid 7DLH medium borderline
Calb1870039790.1 Alkaloid 7DLH medium borderline
Calb1870039800.1 Alkaloid 7DLH medium borderline
Calb1900054940.1 Alkaloid 7DLH medium borderline
Calb1910069650.1 Alkaloid 7DLH low borderline
Calb1930076620.1 Alkaloid 7DLH medium borderline
Calb2280090850.1 Alkaloid 7DLH medium borderline
Calb2280092060.1 Alkaloid 7DLH medium borderline
Calb2310104800.1 Alkaloid 7DLH low borderline
Calb2340109830.1 Alkaloid 7DLH medium borderline
Calb2360111770.1 Alkaloid 7DLH medium borderline
Calb2400120260.1 Alkaloid 7DLH medium borderline
Calb2400121500.1 Alkaloid 7DLH medium borderline
Calb2650150520.1 Alkaloid 7DLH medium borderline
Calb2650157530.1 Alkaloid 7DLH medium borderline
Calb2650157530.2 Alkaloid 7DLH medium borderline