PlantSME Plant secondary metabolism enzyme database

Chiococca alba (chiococca_alba)

Imported from atlas release summary for Chiococca alba.

2531
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 804 19 BAHD (329) View species results
Alkaloid pathway 614 25 7DLGT (110) View species results
Phenylpropanoid pathway 415 12 POD (166) View species results
Flavonoid pathway 325 11 UFGT (209) View species results
Rosmarinic acid pathway 208 7 C4H (90) View species results
Steroid pathway 165 16 CAS (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2546 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 508 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Calb725320302160.1 Alkaloid 7DLH medium borderline
Calb737380304270.1 Alkaloid 7DLH medium borderline
Calb737650304370.1 Alkaloid 7DLH medium borderline
Calb753980308910.1 Alkaloid 7DLH medium borderline
Calb764740313450.1 Alkaloid 7DLH medium borderline
Calb764740313470.1 Alkaloid 7DLH medium borderline
Calb764740313540.1 Alkaloid 7DLH medium borderline
Calb764740313540.2 Alkaloid 7DLH medium borderline
Calb768000315780.1 Alkaloid 7DLH medium borderline
Calb1860035150.1 Alkaloid 8HGO medium borderline
Calb1860035150.2 Alkaloid 8HGO medium borderline
Calb1870041110.1 Alkaloid 8HGO medium pass
Calb1900058680.1 Alkaloid 8HGO medium borderline
Calb1930073040.1 Alkaloid 8HGO medium borderline
Calb1930073040.2 Alkaloid 8HGO medium pass
Calb1930078310.1 Alkaloid 8HGO medium borderline
Calb2300102790.1 Alkaloid 8HGO medium borderline
Calb2720166010.1 Alkaloid 8HGO medium borderline
Calb2720166020.1 Alkaloid 8HGO medium borderline
Calb2750169010.1 Alkaloid 8HGO low borderline
Calb2880175350.1 Alkaloid 8HGO medium borderline
Calb2890175560.1 Alkaloid 8HGO medium borderline
Calb3260191420.1 Alkaloid 8HGO medium borderline
Calb3310197540.1 Alkaloid 8HGO medium pass
Calb3380201110.1 Alkaloid 8HGO medium borderline
Calb702010294520.1 Alkaloid 8HGO medium borderline
Calb748890307050.1 Alkaloid 8HGO medium borderline
Calb748890307050.2 Alkaloid 8HGO medium pass
Calb748890307050.3 Alkaloid 8HGO medium borderline
Calb1880049140.1 Alkaloid ADC low borderline
Calb6790289000.1 Alkaloid ADC medium pass
Calb1063930000320.1 Alkaloid BBE medium borderline
Calb1540012970.1 Alkaloid BBE low borderline
Calb1540012970.2 Alkaloid BBE low borderline
Calb1540012970.3 Alkaloid BBE low borderline
Calb1930078280.1 Alkaloid BBE medium borderline
Calb2360111690.1 Alkaloid BBE medium borderline
Calb2360111700.1 Alkaloid BBE medium borderline
Calb2360111710.1 Alkaloid BBE medium borderline
Calb2360111720.1 Alkaloid BBE medium borderline
Calb2360111730.1 Alkaloid BBE medium borderline
Calb2360111740.1 Alkaloid BBE medium borderline
Calb2360114280.1 Alkaloid BBE medium borderline
Calb2360114290.1 Alkaloid BBE medium borderline
Calb2550135940.1 Alkaloid BBE medium borderline
Calb2650159610.1 Alkaloid BBE medium borderline
Calb2650159620.1 Alkaloid BBE medium borderline
Calb2650159640.1 Alkaloid BBE medium borderline
Calb2750168770.1 Alkaloid BBE low borderline
Calb2750168770.2 Alkaloid BBE low borderline