PlantSME Plant secondary metabolism enzyme database

Citrus sinensis (citrus_sinensis)

Imported from atlas release summary for Citrus sinensis.

2333
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 705 19 BAHD (287) View species results
Alkaloid pathway 549 25 NMT (96) View species results
Phenylpropanoid pathway 468 13 POD (203) View species results
Flavonoid pathway 232 15 UFGT (132) View species results
Rosmarinic acid pathway 191 7 C4H (66) View species results
Steroid pathway 188 14 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1881 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 409 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Csinscaffold000060034270.1 Steroid BR6OX1/CYP85A1 medium borderline
Csinscaffold000140058010.1 Steroid BR6OX1/CYP85A1 medium borderline
Csinscaffold000150060470.1 Steroid BR6OX1/CYP85A1 medium borderline
Csinscaffold000170065850.1 Steroid BR6OX1/CYP85A1 medium borderline
Csinscaffold000570114560.1 Steroid BR6OX1/CYP85A1 medium borderline
Csinscaffold000650119960.1 Steroid BR6OX1/CYP85A1 medium borderline
Csinscaffold003120181880.1 Steroid BR6OX1/CYP85A1 low borderline
Csinscaffold004170193910.1 Steroid BR6OX1/CYP85A1 medium borderline
Csinscaffold004170193920.1 Steroid BR6OX1/CYP85A1 medium borderline
Csinscaffold000010002040.4 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold000010003210.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold000010004420.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold000010004800.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold000020009220.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold000020010410.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold000030016930.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold000030017940.1 Steroid BR6OX2/CYP85A2 medium pass
Csinscaffold000030017950.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold000050030750.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold000070039730.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold000090044630.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold000090046480.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold000100048230.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold000150061110.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold000200073200.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold000200073210.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold000200073280.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold000260085520.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold000300091020.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold000310091530.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold000310091870.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold000310091900.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold000310091900.2 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold000310091900.3 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold000330094410.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold000330094430.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold000330094440.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold000360097210.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold000490108170.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold000490108190.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold000490108200.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold000490108200.2 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold000630119100.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold000630119370.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold000630119400.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold000630119420.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold000730125100.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold000910133750.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold000930134540.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold001250147080.4 Steroid BR6OX2/CYP85A2 low borderline