PlantSME Plant secondary metabolism enzyme database

Citrus sinensis (citrus_sinensis)

Imported from atlas release summary for Citrus sinensis.

2333
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 705 19 BAHD (287) View species results
Alkaloid pathway 549 25 NMT (96) View species results
Phenylpropanoid pathway 468 13 POD (203) View species results
Flavonoid pathway 232 15 UFGT (132) View species results
Rosmarinic acid pathway 191 7 C4H (66) View species results
Steroid pathway 188 14 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1881 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 409 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Csinscaffold001340149510.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold001570154790.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold001680157700.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold001680157710.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold001680157820.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold001680157830.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold001860161610.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold002090165990.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold002530173040.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold002530173040.2 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold003460185990.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold003550187210.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold004380195660.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold004380195660.2 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold004530196760.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold005080200300.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold005080200320.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold005100200460.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold005380202000.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold005470202520.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold005850204280.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold005850204290.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold005850204300.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold005850204310.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold006980209000.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold007170209550.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold007820211530.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold007960211850.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold009070214230.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold009070214250.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold010870217490.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold010870217500.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold010870217510.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold010870217520.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold013570220670.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold013910221080.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold023250227550.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold023480227730.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold034450232690.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold039280234420.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold042750235320.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold050780237590.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold051870237850.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold058970239600.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold060250239880.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold067130241630.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold079340244320.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold092780247340.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold101530249160.1 Steroid BR6OX2/CYP85A2 low borderline
Csinscaffold114090251750.1 Steroid BR6OX2/CYP85A2 low borderline