PlantSME Plant secondary metabolism enzyme database

Citrus sinensis (citrus_sinensis)

Imported from atlas release summary for Citrus sinensis.

2983
Candidate Protein Records
2333
Pathway-Level Records
5625
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 705 19 BAHD (287) View species results
Alkaloid pathway 549 25 NMT (96) View species results
Phenylpropanoid pathway 468 13 POD (203) View species results
Flavonoid pathway 232 15 UFGT (132) View species results
Rosmarinic acid pathway 191 7 C4H (66) View species results
Steroid pathway 188 14 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1881 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 409 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Csinscaffold001050140250.1 Rosmarinic Acid C4H low borderline
Csinscaffold001130142800.1 Rosmarinic Acid C4H low borderline
Csinscaffold001130142810.1 Rosmarinic Acid C4H medium pass
Csinscaffold001130142910.1 Rosmarinic Acid C4H medium pass
Csinscaffold001130142920.1 Rosmarinic Acid C4H medium pass
Csinscaffold001130143040.1 Rosmarinic Acid C4H low borderline
Csinscaffold001200144980.1 Rosmarinic Acid C4H medium pass
Csinscaffold001220146100.1 Rosmarinic Acid C4H low borderline
Csinscaffold001230146390.1 Rosmarinic Acid C4H low borderline
Csinscaffold001310148580.1 Rosmarinic Acid C4H medium pass
Csinscaffold001310148600.1 Rosmarinic Acid C4H medium pass
Csinscaffold001340149510.1 Rosmarinic Acid C4H low borderline
Csinscaffold001680157700.1 Rosmarinic Acid C4H low borderline
Csinscaffold001680157710.1 Rosmarinic Acid C4H low borderline
Csinscaffold001680157820.1 Rosmarinic Acid C4H low borderline
Csinscaffold001680157830.1 Rosmarinic Acid C4H low borderline
Csinscaffold001830161020.1 Rosmarinic Acid C4H low borderline
Csinscaffold001860161600.1 Rosmarinic Acid C4H low borderline
Csinscaffold001860161610.1 Rosmarinic Acid C4H low borderline
Csinscaffold002090165980.1 Rosmarinic Acid C4H low borderline
Csinscaffold002090165990.1 Rosmarinic Acid C4H low borderline
Csinscaffold002100166150.1 Rosmarinic Acid C4H low borderline
Csinscaffold002210167940.1 Rosmarinic Acid C4H low borderline
Csinscaffold002250168630.1 Rosmarinic Acid C4H medium pass
Csinscaffold002520172780.1 Rosmarinic Acid C4H low borderline
Csinscaffold002530173040.1 Rosmarinic Acid C4H medium pass
Csinscaffold002530173040.2 Rosmarinic Acid C4H medium pass
Csinscaffold002710176420.1 Rosmarinic Acid C4H medium pass
Csinscaffold002710176430.1 Rosmarinic Acid C4H medium pass
Csinscaffold002880178800.1 Rosmarinic Acid C4H low borderline
Csinscaffold003120181870.1 Rosmarinic Acid C4H medium pass
Csinscaffold003120181880.1 Rosmarinic Acid C4H low borderline
Csinscaffold003460185990.1 Rosmarinic Acid C4H medium pass
Csinscaffold003460186000.1 Rosmarinic Acid C4H low borderline
Csinscaffold003460186070.1 Rosmarinic Acid C4H low borderline
Csinscaffold003550187210.1 Rosmarinic Acid C4H low borderline
Csinscaffold003890191180.1 Rosmarinic Acid C4H low borderline
Csinscaffold004040192580.1 Rosmarinic Acid C4H medium pass
Csinscaffold004040192580.2 Rosmarinic Acid C4H medium pass
Csinscaffold004130193430.1 Rosmarinic Acid C4H low borderline
Csinscaffold004130193440.1 Rosmarinic Acid C4H low borderline
Csinscaffold004150193860.1 Rosmarinic Acid C4H low borderline
Csinscaffold004170193910.1 Rosmarinic Acid C4H low borderline
Csinscaffold004170193920.1 Rosmarinic Acid C4H low borderline
Csinscaffold004420195950.1 Rosmarinic Acid C4H low borderline
Csinscaffold004530196760.1 Rosmarinic Acid C4H medium pass
Csinscaffold005010199940.1 Rosmarinic Acid C4H low borderline
Csinscaffold005080200300.1 Rosmarinic Acid C4H medium pass
Csinscaffold005080200320.1 Rosmarinic Acid C4H low borderline
Csinscaffold005100200440.1 Rosmarinic Acid C4H low borderline