PlantSME Plant secondary metabolism enzyme database

Citrus sinensis (citrus_sinensis)

Imported from atlas release summary for Citrus sinensis.

2983
Candidate Protein Records
2333
Pathway-Level Records
5625
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 705 19 BAHD (287) View species results
Alkaloid pathway 549 25 NMT (96) View species results
Phenylpropanoid pathway 468 13 POD (203) View species results
Flavonoid pathway 232 15 UFGT (132) View species results
Rosmarinic acid pathway 191 7 C4H (66) View species results
Steroid pathway 188 14 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1881 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 409 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Csinscaffold021220226540.1 Rosmarinic Acid C4H low borderline
Csinscaffold023250227550.1 Rosmarinic Acid C4H low borderline
Csinscaffold023480227730.1 Rosmarinic Acid C4H medium pass
Csinscaffold028350230220.1 Rosmarinic Acid C4H low borderline
Csinscaffold031590231440.1 Rosmarinic Acid C4H low borderline
Csinscaffold031590231450.1 Rosmarinic Acid C4H low borderline
Csinscaffold033190232100.1 Rosmarinic Acid C4H medium pass
Csinscaffold034450232690.1 Rosmarinic Acid C4H low borderline
Csinscaffold036860233630.1 Rosmarinic Acid C4H low borderline
Csinscaffold039280234420.1 Rosmarinic Acid C4H medium pass
Csinscaffold040770234790.1 Rosmarinic Acid C4H medium pass
Csinscaffold042750235320.1 Rosmarinic Acid C4H medium pass
Csinscaffold045600236160.1 Rosmarinic Acid C4H low borderline
Csinscaffold045600236160.2 Rosmarinic Acid C4H low borderline
Csinscaffold046670236370.1 Rosmarinic Acid C4H low borderline
Csinscaffold048600237010.1 Rosmarinic Acid C4H low borderline
Csinscaffold051870237850.1 Rosmarinic Acid C4H low borderline
Csinscaffold054850238640.1 Rosmarinic Acid C4H low borderline
Csinscaffold063940240810.1 Rosmarinic Acid C4H low borderline
Csinscaffold064760240980.1 Rosmarinic Acid C4H low borderline
Csinscaffold066210241330.1 Rosmarinic Acid C4H low borderline
Csinscaffold066810241520.1 Rosmarinic Acid C4H medium pass
Csinscaffold067130241630.1 Rosmarinic Acid C4H medium pass
Csinscaffold074980243410.1 Rosmarinic Acid C4H low borderline
Csinscaffold076810243830.1 Rosmarinic Acid C4H low borderline
Csinscaffold077380243940.1 Rosmarinic Acid C4H low borderline
Csinscaffold078620244140.1 Rosmarinic Acid C4H low borderline
Csinscaffold079340244320.1 Rosmarinic Acid C4H low borderline
Csinscaffold080230244550.1 Rosmarinic Acid C4H low borderline
Csinscaffold084460245380.1 Rosmarinic Acid C4H medium pass
Csinscaffold086020245940.1 Rosmarinic Acid C4H low borderline
Csinscaffold086810246050.1 Rosmarinic Acid C4H low borderline
Csinscaffold092780247340.1 Rosmarinic Acid C4H low borderline
Csinscaffold101530249160.1 Rosmarinic Acid C4H low borderline
Csinscaffold103540249520.1 Rosmarinic Acid C4H low borderline
Csinscaffold114090251750.1 Rosmarinic Acid C4H medium pass
Csinscaffold116120252160.1 Rosmarinic Acid C4H medium pass
Csinscaffold118350252480.1 Rosmarinic Acid C4H medium pass
Csinscaffold119870252800.1 Rosmarinic Acid C4H low borderline
Csinscaffold124270253490.1 Rosmarinic Acid C4H low borderline
Csinscaffold000040023970.1 Rosmarinic Acid CPR medium pass
Csinscaffold000040023970.2 Rosmarinic Acid CPR medium pass
Csinscaffold000040023970.3 Rosmarinic Acid CPR medium pass
Csinscaffold000040023970.4 Rosmarinic Acid CPR medium pass
Csinscaffold000040023970.5 Rosmarinic Acid CPR medium pass
Csinscaffold000040023970.6 Rosmarinic Acid CPR medium pass
Csinscaffold000040023970.7 Rosmarinic Acid CPR low borderline
Csinscaffold000040026150.1 Rosmarinic Acid CPR medium pass
Csinscaffold000040026150.2 Rosmarinic Acid CPR medium pass
Csinscaffold000040026150.3 Rosmarinic Acid CPR medium pass