PlantSME Plant secondary metabolism enzyme database

Cocos nucifera (cocos_nucifera)

Imported from atlas release summary for Cocos nucifera.

1334
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 374 18 BAHD (143) View species results
Alkaloid pathway 280 20 7DLGT (73) View species results
Phenylpropanoid pathway 277 13 POD (118) View species results
Flavonoid pathway 211 12 UFGT (124) View species results
Rosmarinic acid pathway 122 7 C4H (55) View species results
Steroid pathway 70 10 SMT1/SMT2/SMT3 (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1177 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 234 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
CnucC694063410004640 Steroid BR6OX1/CYP85A1 medium borderline
Cnucscaffold103850012450 Steroid BR6OX1/CYP85A1 medium borderline
Cnucscaffold105770015260 Steroid BR6OX1/CYP85A1 medium borderline
Cnucscaffold105770015270 Steroid BR6OX1/CYP85A1 medium borderline
Cnucscaffold105770015290 Steroid BR6OX1/CYP85A1 medium borderline
Cnucscaffold105770015340 Steroid BR6OX1/CYP85A1 medium borderline
Cnucscaffold110110020640 Steroid BR6OX1/CYP85A1 medium borderline
Cnucscaffold116700028280 Steroid BR6OX1/CYP85A1 low borderline
Cnucscaffold17860076380 Steroid BR6OX1/CYP85A1 medium borderline
Cnucscaffold23080108360 Steroid BR6OX1/CYP85A1 medium borderline
Cnucscaffold262760122540 Steroid BR6OX1/CYP85A1 medium borderline
Cnucscaffold269060125640 Steroid BR6OX1/CYP85A1 medium borderline
Cnucscaffold28640131590 Steroid BR6OX1/CYP85A1 low borderline
Cnucscaffold34030150210 Steroid BR6OX1/CYP85A1 medium borderline
Cnucscaffold34390151470 Steroid BR6OX1/CYP85A1 medium borderline
Cnucscaffold35080154230 Steroid BR6OX1/CYP85A1 medium borderline
Cnucscaffold69620237250 Steroid BR6OX1/CYP85A1 medium borderline
CnucC690574960000970 Steroid BR6OX2/CYP85A2 low borderline
CnucC692600440002590 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold102900010950 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold10490013960 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold1130023930 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold1360045320 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold13660047720 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold15070058960 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold15690062740 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold166820069490 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold197940087730 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold24240114300 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold24880116550 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold24960116970 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold24960116980 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold262760122550 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold2690124740 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold289750132390 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold321670144190 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold321670144200 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold33420148760 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold36160157190 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold363820158430 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold36610158630 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold38680167120 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold42260177140 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold4400184660 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold446880186780 Steroid BR6OX2/CYP85A2 medium borderline
Cnucscaffold46070188850 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold4760192800 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold49100196100 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold58620217860 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold590219620 Steroid BR6OX2/CYP85A2 low borderline