PlantSME Plant secondary metabolism enzyme database

Cocos nucifera (cocos_nucifera)

Imported from atlas release summary for Cocos nucifera.

1334
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 374 18 BAHD (143) View species results
Alkaloid pathway 280 20 7DLGT (73) View species results
Phenylpropanoid pathway 277 13 POD (118) View species results
Flavonoid pathway 211 12 UFGT (124) View species results
Rosmarinic acid pathway 122 7 C4H (55) View species results
Steroid pathway 70 10 SMT1/SMT2/SMT3 (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1177 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 234 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Cnucscaffold65190230000 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold66570232580 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold69880237410 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold7290243850 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold7290243860 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold740245910 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold760250220 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold80256420 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold80256430 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold80256440 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold80256450 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold80256470 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold80256480 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold80256490 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold80256520 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold85980264540 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold91010270510 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold91690271910 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold92910272700 Steroid BR6OX2/CYP85A2 low borderline
Cnucscaffold103270011740 Steroid CAS low borderline
Cnucscaffold1160027920 Steroid CAS medium pass
Cnucscaffold13160041300 Steroid CAS medium pass
Cnucscaffold137090047890 Steroid CAS medium pass
Cnucscaffold181810078110 Steroid CAS medium pass
Cnucscaffold21800099320 Steroid CAS medium pass
Cnucscaffold22910107450 Steroid CAS low borderline
Cnucscaffold27080126130 Steroid CAS low borderline
Cnucscaffold29570134520 Steroid CAS medium pass
Cnucscaffold29570134530 Steroid CAS low borderline
Cnucscaffold29570134540 Steroid CAS medium pass
Cnucscaffold33420148680 Steroid CAS medium pass
Cnucscaffold35080154240 Steroid CAS medium pass
Cnucscaffold35080154250 Steroid CAS medium pass
Cnucscaffold37760163160 Steroid CAS medium pass
Cnucscaffold40630172610 Steroid CAS medium pass
Cnucscaffold51570199430 Steroid CAS low borderline
Cnucscaffold5670212960 Steroid CAS medium pass
Cnucscaffold5670212970 Steroid CAS medium pass
Cnucscaffold5670212980 Steroid CAS medium pass
Cnucscaffold6010222110 Steroid CAS medium pass
Cnucscaffold6010222120 Steroid CAS medium pass
Cnucscaffold17750075820 Steroid CPD/CYP90A1 low borderline
Cnucscaffold179710077170 Steroid CPD/CYP90A1 low borderline
Cnucscaffold18530080310 Steroid CPD/CYP90A1 medium borderline
Cnucscaffold26190122480 Steroid CPD/CYP90A1 medium borderline
Cnucscaffold272610127250 Steroid CPD/CYP90A1 low borderline
Cnucscaffold2980135450 Steroid CPD/CYP90A1 low borderline
Cnucscaffold5540208890 Steroid CPD/CYP90A1 low borderline
Cnucscaffold56750213390 Steroid CPD/CYP90A1 medium borderline
Cnucscaffold68990235580 Steroid CPD/CYP90A1 medium borderline