PlantSME Plant secondary metabolism enzyme database

Cocos nucifera (cocos_nucifera)

Imported from atlas release summary for Cocos nucifera.

1540
Candidate Protein Records
1334
Pathway-Level Records
3174
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 374 18 BAHD (143) View species results
Alkaloid pathway 280 20 7DLGT (73) View species results
Phenylpropanoid pathway 277 13 POD (118) View species results
Flavonoid pathway 211 12 UFGT (124) View species results
Rosmarinic acid pathway 122 7 C4H (55) View species results
Steroid pathway 70 10 SMT1/SMT2/SMT3 (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1177 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 234 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Cnucscaffold21020096420 Alkaloid COR medium pass
Cnucscaffold270125690 Alkaloid COR medium pass
Cnucscaffold32260144290 Alkaloid COR medium pass
Cnucscaffold32260144300 Alkaloid COR medium pass
Cnucscaffold34660151800 Alkaloid COR medium pass
Cnucscaffold35230154680 Alkaloid COR medium pass
Cnucscaffold35230154700 Alkaloid COR medium pass
Cnucscaffold35250154810 Alkaloid COR low borderline
Cnucscaffold44380186070 Alkaloid COR medium pass
Cnucscaffold44380186080 Alkaloid COR low borderline
Cnucscaffold71570240890 Alkaloid COR low borderline
Cnucscaffold78020252800 Alkaloid COR medium pass
Cnucscaffold84100262380 Alkaloid COR medium pass
Cnucscaffold101360009650 Alkaloid CYP719 medium borderline
Cnucscaffold101360009660 Alkaloid CYP719 medium borderline
Cnucscaffold101360009670 Alkaloid CYP719 medium borderline
Cnucscaffold105770015340 Alkaloid CYP719 medium borderline
Cnucscaffold121840033090 Alkaloid CYP719 medium borderline
Cnucscaffold121840033100 Alkaloid CYP719 medium borderline
Cnucscaffold269060125640 Alkaloid CYP719 medium borderline
Cnucscaffold34680153260 Alkaloid CYP719 medium borderline
Cnucscaffold5540208870 Alkaloid CYP719 medium borderline
Cnucscaffold89360268450 Alkaloid CYP719 low borderline
Cnucscaffold105680015230 Alkaloid CYP80B1 medium borderline
Cnucscaffold116700028280 Alkaloid CYP80B1 medium borderline
Cnucscaffold116700028310 Alkaloid CYP80B1 medium borderline
Cnucscaffold149380057880 Alkaloid CYP80B1 low borderline
Cnucscaffold16390067660 Alkaloid CYP80B1 low borderline
Cnucscaffold24880116560 Alkaloid CYP80B1 medium borderline
Cnucscaffold36160157190 Alkaloid CYP80B1 medium borderline
Cnucscaffold43310181210 Alkaloid CYP80B1 medium borderline
Cnucscaffold43310181220 Alkaloid CYP80B1 medium borderline
Cnucscaffold111400021420 Alkaloid CYP80F1 low borderline
CnucC693739650004030 Alkaloid G8O/G8H low borderline
CnucC694063410004640 Alkaloid G8O/G8H medium borderline
Cnucscaffold103850012450 Alkaloid G8O/G8H medium borderline
Cnucscaffold105770015260 Alkaloid G8O/G8H medium borderline
Cnucscaffold105770015270 Alkaloid G8O/G8H medium borderline
Cnucscaffold105770015280 Alkaloid G8O/G8H medium pass
Cnucscaffold105770015290 Alkaloid G8O/G8H medium borderline
Cnucscaffold1130023870 Alkaloid G8O/G8H medium borderline
Cnucscaffold1130023880 Alkaloid G8O/G8H medium borderline
Cnucscaffold15070058750 Alkaloid G8O/G8H medium pass
Cnucscaffold197940087730 Alkaloid G8O/G8H medium borderline
Cnucscaffold199960089200 Alkaloid G8O/G8H medium borderline
Cnucscaffold2440114820 Alkaloid G8O/G8H low borderline
Cnucscaffold24960116980 Alkaloid G8O/G8H medium borderline
Cnucscaffold262760122560 Alkaloid G8O/G8H medium borderline
Cnucscaffold28870132230 Alkaloid G8O/G8H low borderline
Cnucscaffold338370149550 Alkaloid G8O/G8H medium borderline