PlantSME Plant secondary metabolism enzyme database

Dianthus caryophyllus (dianthus_caryophyllus)

Imported from atlas release summary for Dianthus caryophyllus.

1667
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 483 20 BAHD (183) View species results
Phenylpropanoid pathway 402 12 POD (198) View species results
Alkaloid pathway 339 20 7DLGT (65) View species results
Flavonoid pathway 215 12 UFGT (138) View species results
Rosmarinic acid pathway 134 7 C4H (46) View species results
Steroid pathway 94 11 SMT1/SMT2/SMT3 (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1453 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
genome_Dca10101.1 Alkaloid T3O medium borderline
genome_Dca1069.1 Alkaloid T3O medium borderline
genome_Dca1070.1 Alkaloid T3O medium borderline
genome_Dca1072.1 Alkaloid T3O medium borderline
genome_Dca1074.1 Alkaloid T3O medium borderline
genome_Dca1075.1 Alkaloid T3O medium borderline
genome_Dca12194.1 Alkaloid T3O medium borderline
genome_Dca12318.1 Alkaloid T3O medium borderline
genome_Dca12319.1 Alkaloid T3O medium borderline
genome_Dca12320.1 Alkaloid T3O medium borderline
genome_Dca12321.1 Alkaloid T3O medium borderline
genome_Dca14611.1 Alkaloid T3O medium pass
genome_Dca15656.1 Alkaloid T3O medium pass
genome_Dca15704.1 Alkaloid T3O medium borderline
genome_Dca16589.1 Alkaloid T3O medium borderline
genome_Dca16740.1 Alkaloid T3O low borderline
genome_Dca16792.1 Alkaloid T3O low borderline
genome_Dca17363.1 Alkaloid T3O medium borderline
genome_Dca18056.1 Alkaloid T3O medium pass
genome_Dca18537.1 Alkaloid T3O low borderline
genome_Dca18820.1 Alkaloid T3O medium borderline
genome_Dca19144.1 Alkaloid T3O medium borderline
genome_Dca19146.1 Alkaloid T3O medium borderline
genome_Dca19212.1 Alkaloid T3O medium borderline
genome_Dca19224.1 Alkaloid T3O medium borderline
genome_Dca19800.1 Alkaloid T3O medium borderline
genome_Dca19861.1 Alkaloid T3O medium borderline
genome_Dca22367.1 Alkaloid T3O medium pass
genome_Dca23029.1 Alkaloid T3O low borderline
genome_Dca23352.1 Alkaloid T3O low borderline
genome_Dca23505.1 Alkaloid T3O medium pass
genome_Dca23611.1 Alkaloid T3O medium borderline
genome_Dca23612.1 Alkaloid T3O medium borderline
genome_Dca23613.1 Alkaloid T3O medium borderline
genome_Dca23614.1 Alkaloid T3O medium borderline
genome_Dca23616.1 Alkaloid T3O medium borderline
genome_Dca24251.1 Alkaloid T3O medium borderline
genome_Dca24738.1 Alkaloid T3O medium pass
genome_Dca24769.1 Alkaloid T3O medium pass
genome_Dca26293.1 Alkaloid T3O medium borderline
genome_Dca26294.1 Alkaloid T3O medium borderline
genome_Dca26546.1 Alkaloid T3O medium pass
genome_Dca27258.1 Alkaloid T3O medium pass
genome_Dca2757.1 Alkaloid T3O medium pass
genome_Dca27717.1 Alkaloid T3O medium pass
genome_Dca27971.1 Alkaloid T3O medium borderline
genome_Dca2864.1 Alkaloid T3O medium borderline
genome_Dca2866.1 Alkaloid T3O medium borderline
genome_Dca30174.1 Alkaloid T3O medium borderline
genome_Dca30175.1 Alkaloid T3O medium borderline