PlantSME Plant secondary metabolism enzyme database

Dianthus caryophyllus (dianthus_caryophyllus)

Imported from atlas release summary for Dianthus caryophyllus.

1667
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 483 20 BAHD (183) View species results
Phenylpropanoid pathway 402 12 POD (198) View species results
Alkaloid pathway 339 20 7DLGT (65) View species results
Flavonoid pathway 215 12 UFGT (138) View species results
Rosmarinic acid pathway 134 7 C4H (46) View species results
Steroid pathway 94 11 SMT1/SMT2/SMT3 (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1453 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
genome_Dca30309.1 Alkaloid T3O low borderline
genome_Dca30574.1 Alkaloid T3O medium pass
genome_Dca31168.1 Alkaloid T3O medium pass
genome_Dca32051.1 Alkaloid T3O medium pass
genome_Dca32079.1 Alkaloid T3O medium borderline
genome_Dca32280.1 Alkaloid T3O medium borderline
genome_Dca32601.1 Alkaloid T3O medium borderline
genome_Dca32662.1 Alkaloid T3O medium borderline
genome_Dca33424.1 Alkaloid T3O medium borderline
genome_Dca33671.1 Alkaloid T3O medium pass
genome_Dca34093.1 Alkaloid T3O low borderline
genome_Dca3593.1 Alkaloid T3O low borderline
genome_Dca35979.1 Alkaloid T3O low borderline
genome_Dca37618.1 Alkaloid T3O medium borderline
genome_Dca3865.1 Alkaloid T3O low borderline
genome_Dca41038.1 Alkaloid T3O medium borderline
genome_Dca41435.1 Alkaloid T3O high pass
genome_Dca42414.1 Alkaloid T3O medium borderline
genome_Dca42416.1 Alkaloid T3O medium borderline
genome_Dca43706.1 Alkaloid T3O medium borderline
genome_Dca43970.1 Alkaloid T3O low borderline
genome_Dca43993.1 Alkaloid T3O medium pass
genome_Dca44828.1 Alkaloid T3O high pass
genome_Dca44828.2 Alkaloid T3O high pass
genome_Dca45347.1 Alkaloid T3O medium borderline
genome_Dca47205.1 Alkaloid T3O medium borderline
genome_Dca47550.1 Alkaloid T3O medium borderline
genome_Dca49335.1 Alkaloid T3O medium pass
genome_Dca51994.1 Alkaloid T3O medium pass
genome_Dca52259.1 Alkaloid T3O medium borderline
genome_Dca52260.1 Alkaloid T3O medium borderline
genome_Dca52340.1 Alkaloid T3O low borderline
genome_Dca52510.1 Alkaloid T3O low borderline
genome_Dca53923.1 Alkaloid T3O medium borderline
genome_Dca54103.1 Alkaloid T3O medium pass
genome_Dca54294.1 Alkaloid T3O low borderline
genome_Dca54355.1 Alkaloid T3O medium borderline
genome_Dca54404.1 Alkaloid T3O medium borderline
genome_Dca56371.1 Alkaloid T3O medium borderline
genome_Dca56409.1 Alkaloid T3O medium borderline
genome_Dca56410.1 Alkaloid T3O medium borderline
genome_Dca56411.1 Alkaloid T3O medium borderline
genome_Dca56413.1 Alkaloid T3O medium borderline
genome_Dca56415.1 Alkaloid T3O medium borderline
genome_Dca57269.1 Alkaloid T3O medium pass
genome_Dca58572.1 Alkaloid T3O medium borderline
genome_Dca58736.1 Alkaloid T3O medium borderline
genome_Dca58737.1 Alkaloid T3O medium borderline
genome_Dca59090.1 Alkaloid T3O medium borderline
genome_Dca6055.1 Alkaloid T3O low borderline