PlantSME Plant secondary metabolism enzyme database

Dianthus caryophyllus (dianthus_caryophyllus)

Imported from atlas release summary for Dianthus caryophyllus.

2090
Candidate Protein Records
1667
Pathway-Level Records
4142
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 483 20 BAHD (183) View species results
Phenylpropanoid pathway 402 12 POD (198) View species results
Alkaloid pathway 339 20 7DLGT (65) View species results
Flavonoid pathway 215 12 UFGT (138) View species results
Rosmarinic acid pathway 134 7 C4H (46) View species results
Steroid pathway 94 11 SMT1/SMT2/SMT3 (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1453 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Protein/Isoform Record Pathway Family Confidence Status
genome_Dca60695.1 Alkaloid T3O medium borderline
genome_Dca6114.1 Alkaloid T3O medium pass
genome_Dca61859.1 Alkaloid T3O medium borderline
genome_Dca61873.1 Alkaloid T3O medium borderline
genome_Dca6194.1 Alkaloid T3O medium borderline
genome_Dca62130.1 Alkaloid T3O medium borderline
genome_Dca62445.1 Alkaloid T3O medium borderline
genome_Dca62447.1 Alkaloid T3O medium borderline
genome_Dca62449.1 Alkaloid T3O medium borderline
genome_Dca6381.1 Alkaloid T3O medium borderline
genome_Dca64.1 Alkaloid T3O medium pass
genome_Dca6520.1 Alkaloid T3O medium pass
genome_Dca6711.1 Alkaloid T3O medium borderline
genome_Dca68.1 Alkaloid T3O medium borderline
genome_Dca7296.1 Alkaloid T3O medium borderline
genome_Dca7297.1 Alkaloid T3O medium borderline
genome_Dca8135.1 Alkaloid T3O medium borderline
genome_Dca9244.1 Alkaloid T3O medium pass