PlantSME Plant secondary metabolism enzyme database

Dianthus caryophyllus (dianthus_caryophyllus)

Imported from atlas release summary for Dianthus caryophyllus.

1667
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 483 20 BAHD (183) View species results
Phenylpropanoid pathway 402 12 POD (198) View species results
Alkaloid pathway 339 20 7DLGT (65) View species results
Flavonoid pathway 215 12 UFGT (138) View species results
Rosmarinic acid pathway 134 7 C4H (46) View species results
Steroid pathway 94 11 SMT1/SMT2/SMT3 (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1453 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Gene Pathway Family Confidence Status
genome_Dca29077.1 Flavonoid UFGT high pass
genome_Dca29425.1 Flavonoid UFGT medium pass
genome_Dca29485.1 Flavonoid UFGT high pass
genome_Dca29486.1 Flavonoid UFGT high pass
genome_Dca29487.1 Flavonoid UFGT high pass
genome_Dca29488.1 Flavonoid UFGT high pass
genome_Dca29617.1 Flavonoid UFGT high pass
genome_Dca30270.1 Flavonoid UFGT high pass
genome_Dca31137.1 Flavonoid UFGT low borderline
genome_Dca31720.1 Flavonoid UFGT high pass
genome_Dca31721.1 Flavonoid UFGT medium pass
genome_Dca31722.1 Flavonoid UFGT high pass
genome_Dca31854.1 Flavonoid UFGT medium pass
genome_Dca3205.1 Flavonoid UFGT high pass
genome_Dca32424.1 Flavonoid UFGT medium pass
genome_Dca32426.1 Flavonoid UFGT medium pass
genome_Dca32668.1 Flavonoid UFGT medium pass
genome_Dca32669.1 Flavonoid UFGT medium pass
genome_Dca32670.1 Flavonoid UFGT medium pass
genome_Dca32671.1 Flavonoid UFGT medium pass
genome_Dca3285.1 Flavonoid UFGT medium pass
genome_Dca32886.1 Flavonoid UFGT low borderline
genome_Dca32887.1 Flavonoid UFGT low borderline
genome_Dca32900.1 Flavonoid UFGT medium pass
genome_Dca33268.1 Flavonoid UFGT low borderline
genome_Dca33307.1 Flavonoid UFGT medium pass
genome_Dca33447.1 Flavonoid UFGT medium pass
genome_Dca33448.1 Flavonoid UFGT medium pass
genome_Dca35647.1 Flavonoid UFGT medium pass
genome_Dca35975.1 Flavonoid UFGT high pass
genome_Dca35976.1 Flavonoid UFGT medium pass
genome_Dca36907.1 Flavonoid UFGT high pass
genome_Dca37117.1 Flavonoid UFGT medium pass
genome_Dca38937.1 Flavonoid UFGT medium pass
genome_Dca39933.1 Flavonoid UFGT medium pass
genome_Dca40902.1 Flavonoid UFGT medium pass
genome_Dca41029.1 Flavonoid UFGT high pass
genome_Dca41469.1 Flavonoid UFGT high pass
genome_Dca41795.1 Flavonoid UFGT medium pass
genome_Dca42197.1 Flavonoid UFGT medium pass
genome_Dca43361.1 Flavonoid UFGT low borderline
genome_Dca43399.1 Flavonoid UFGT medium pass
genome_Dca43923.1 Flavonoid UFGT medium pass
genome_Dca44180.1 Flavonoid UFGT medium pass
genome_Dca44180.2 Flavonoid UFGT medium pass
genome_Dca44368.1 Flavonoid UFGT high pass
genome_Dca444.1 Flavonoid UFGT medium pass
genome_Dca446.1 Flavonoid UFGT medium pass
genome_Dca447.1 Flavonoid UFGT medium pass
genome_Dca44761.1 Flavonoid UFGT high pass