PlantSME Plant secondary metabolism enzyme database

Dianthus caryophyllus (dianthus_caryophyllus)

Imported from atlas release summary for Dianthus caryophyllus.

1667
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 483 20 BAHD (183) View species results
Phenylpropanoid pathway 402 12 POD (198) View species results
Alkaloid pathway 339 20 7DLGT (65) View species results
Flavonoid pathway 215 12 UFGT (138) View species results
Rosmarinic acid pathway 134 7 C4H (46) View species results
Steroid pathway 94 11 SMT1/SMT2/SMT3 (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1453 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Gene Pathway Family Confidence Status
genome_Dca44762.1 Flavonoid UFGT medium pass
genome_Dca44949.1 Flavonoid UFGT high pass
genome_Dca45681.1 Flavonoid UFGT medium pass
genome_Dca45684.1 Flavonoid UFGT medium pass
genome_Dca46093.1 Flavonoid UFGT medium pass
genome_Dca46302.1 Flavonoid UFGT high pass
genome_Dca46303.1 Flavonoid UFGT medium pass
genome_Dca46947.1 Flavonoid UFGT high pass
genome_Dca47272.1 Flavonoid UFGT high pass
genome_Dca47506.1 Flavonoid UFGT high pass
genome_Dca47507.1 Flavonoid UFGT medium pass
genome_Dca47835.1 Flavonoid UFGT high pass
genome_Dca48452.1 Flavonoid UFGT high pass
genome_Dca48590.1 Flavonoid UFGT medium pass
genome_Dca49410.1 Flavonoid UFGT high pass
genome_Dca49518.1 Flavonoid UFGT medium pass
genome_Dca49519.1 Flavonoid UFGT low borderline
genome_Dca49520.1 Flavonoid UFGT medium pass
genome_Dca50415.1 Flavonoid UFGT medium pass
genome_Dca51515.1 Flavonoid UFGT low borderline
genome_Dca5239.1 Flavonoid UFGT high pass
genome_Dca5241.1 Flavonoid UFGT high pass
genome_Dca5242.1 Flavonoid UFGT medium pass
genome_Dca52885.1 Flavonoid UFGT medium pass
genome_Dca53304.1 Flavonoid UFGT high pass
genome_Dca53305.1 Flavonoid UFGT medium pass
genome_Dca53491.1 Flavonoid UFGT medium pass
genome_Dca5362.1 Flavonoid UFGT medium pass
genome_Dca54998.1 Flavonoid UFGT high pass
genome_Dca55914.1 Flavonoid UFGT medium pass
genome_Dca56048.1 Flavonoid UFGT medium pass
genome_Dca56445.1 Flavonoid UFGT high pass
genome_Dca5728.1 Flavonoid UFGT medium pass
genome_Dca5731.1 Flavonoid UFGT medium pass
genome_Dca57346.1 Flavonoid UFGT medium pass
genome_Dca57349.1 Flavonoid UFGT high pass
genome_Dca57379.1 Flavonoid UFGT medium pass
genome_Dca59180.1 Flavonoid UFGT high pass
genome_Dca60360.1 Flavonoid UFGT high pass
genome_Dca605.1 Flavonoid UFGT medium pass
genome_Dca60514.1 Flavonoid UFGT high pass
genome_Dca62090.1 Flavonoid UFGT high pass
genome_Dca62091.1 Flavonoid UFGT high pass
genome_Dca62092.1 Flavonoid UFGT high pass
genome_Dca62093.1 Flavonoid UFGT high pass
genome_Dca62094.1 Flavonoid UFGT high pass
genome_Dca62095.1 Flavonoid UFGT high pass
genome_Dca6411.1 Flavonoid UFGT high pass
genome_Dca7368.1 Flavonoid UFGT medium pass
genome_Dca738.1 Flavonoid UFGT high pass