PlantSME Plant secondary metabolism enzyme database

Dianthus caryophyllus (dianthus_caryophyllus)

Imported from atlas release summary for Dianthus caryophyllus.

2090
Candidate Protein Records
1667
Pathway-Level Records
4142
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 483 20 BAHD (183) View species results
Phenylpropanoid pathway 402 12 POD (198) View species results
Alkaloid pathway 339 20 7DLGT (65) View species results
Flavonoid pathway 215 12 UFGT (138) View species results
Rosmarinic acid pathway 134 7 C4H (46) View species results
Steroid pathway 94 11 SMT1/SMT2/SMT3 (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1453 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
genome_Dca37019.1 Alkaloid GS low borderline
genome_Dca37555.1 Alkaloid GS low borderline
genome_Dca42709.1 Alkaloid GS medium pass
genome_Dca43748.1 Alkaloid GS high pass
genome_Dca44503.1 Alkaloid GS low borderline
genome_Dca47429.1 Alkaloid GS low borderline
genome_Dca49521.1 Alkaloid GS medium pass
genome_Dca5249.1 Alkaloid GS high pass
genome_Dca5251.1 Alkaloid GS high pass
genome_Dca5252.1 Alkaloid GS high pass
genome_Dca5253.1 Alkaloid GS high pass
genome_Dca52791.1 Alkaloid GS low borderline
genome_Dca56436.1 Alkaloid GS low borderline
genome_Dca56437.1 Alkaloid GS low borderline
genome_Dca56438.1 Alkaloid GS low borderline
genome_Dca56439.1 Alkaloid GS low borderline
genome_Dca57857.1 Alkaloid GS high pass
genome_Dca59891.1 Alkaloid GS medium pass
genome_Dca60590.1 Alkaloid GS high pass
genome_Dca60618.1 Alkaloid GS high pass
genome_Dca106.1 Alkaloid H6H low borderline
genome_Dca11175.1 Alkaloid H6H medium borderline
genome_Dca13496.1 Alkaloid H6H medium borderline
genome_Dca137.1 Alkaloid H6H medium borderline
genome_Dca15770.1 Alkaloid H6H medium pass
genome_Dca15966.1 Alkaloid H6H low borderline
genome_Dca16994.1 Alkaloid H6H medium borderline
genome_Dca1746.1 Alkaloid H6H high pass
genome_Dca19461.1 Alkaloid H6H low borderline
genome_Dca19467.1 Alkaloid H6H medium borderline
genome_Dca20260.1 Alkaloid H6H medium borderline
genome_Dca21223.1 Alkaloid H6H low borderline
genome_Dca23006.1 Alkaloid H6H high pass
genome_Dca23007.1 Alkaloid H6H medium borderline
genome_Dca23008.1 Alkaloid H6H medium borderline
genome_Dca23009.1 Alkaloid H6H medium borderline
genome_Dca23712.1 Alkaloid H6H low borderline
genome_Dca24085.1 Alkaloid H6H low borderline
genome_Dca26389.1 Alkaloid H6H low borderline
genome_Dca26804.1 Alkaloid H6H medium pass
genome_Dca28055.1 Alkaloid H6H low borderline
genome_Dca28617.1 Alkaloid H6H low borderline
genome_Dca30868.1 Alkaloid H6H low borderline
genome_Dca30890.1 Alkaloid H6H low borderline
genome_Dca3130.1 Alkaloid H6H low borderline
genome_Dca32918.1 Alkaloid H6H medium borderline
genome_Dca34719.1 Alkaloid H6H high pass
genome_Dca35009.1 Alkaloid H6H low borderline
genome_Dca35532.1 Alkaloid H6H medium pass
genome_Dca35846.1 Alkaloid H6H low borderline