PlantSME Plant secondary metabolism enzyme database

Dianthus caryophyllus (dianthus_caryophyllus)

Imported from atlas release summary for Dianthus caryophyllus.

2090
Candidate Protein Records
1667
Pathway-Level Records
4142
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 483 20 BAHD (183) View species results
Phenylpropanoid pathway 402 12 POD (198) View species results
Alkaloid pathway 339 20 7DLGT (65) View species results
Flavonoid pathway 215 12 UFGT (138) View species results
Rosmarinic acid pathway 134 7 C4H (46) View species results
Steroid pathway 94 11 SMT1/SMT2/SMT3 (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1453 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
genome_Dca34485.1 Phenylpropanoid CSE low borderline
genome_Dca3450.1 Phenylpropanoid CSE medium pass
genome_Dca3451.1 Phenylpropanoid CSE medium pass
genome_Dca3826.1 Phenylpropanoid CSE medium pass
genome_Dca38460.1 Phenylpropanoid CSE medium pass
genome_Dca3850.1 Phenylpropanoid CSE medium pass
genome_Dca43759.1 Phenylpropanoid CSE medium pass
genome_Dca43775.1 Phenylpropanoid CSE medium pass
genome_Dca45992.1 Phenylpropanoid CSE low borderline
genome_Dca46091.1 Phenylpropanoid CSE medium pass
genome_Dca46243.1 Phenylpropanoid CSE medium pass
genome_Dca47774.1 Phenylpropanoid CSE medium pass
genome_Dca48251.1 Phenylpropanoid CSE medium pass
genome_Dca48604.1 Phenylpropanoid CSE medium pass
genome_Dca49532.1 Phenylpropanoid CSE medium pass
genome_Dca52986.1 Phenylpropanoid CSE medium pass
genome_Dca5628.1 Phenylpropanoid CSE medium pass
genome_Dca6198.1 Phenylpropanoid CSE medium pass
genome_Dca8928.1 Phenylpropanoid CSE medium pass
genome_Dca12310.1 Phenylpropanoid F5H/CYP84A medium borderline
genome_Dca12314.1 Phenylpropanoid F5H/CYP84A medium borderline
genome_Dca19799.1 Phenylpropanoid F5H/CYP84A medium borderline
genome_Dca22.1 Phenylpropanoid F5H/CYP84A medium borderline
genome_Dca26294.1 Phenylpropanoid F5H/CYP84A medium borderline
genome_Dca32602.1 Phenylpropanoid F5H/CYP84A medium borderline
genome_Dca32605.1 Phenylpropanoid F5H/CYP84A medium borderline
genome_Dca35404.1 Phenylpropanoid F5H/CYP84A medium borderline
genome_Dca37628.1 Phenylpropanoid F5H/CYP84A low borderline
genome_Dca44828.1 Phenylpropanoid F5H/CYP84A medium borderline
genome_Dca44828.2 Phenylpropanoid F5H/CYP84A medium borderline
genome_Dca56412.1 Phenylpropanoid F5H/CYP84A medium pass
genome_Dca56418.1 Phenylpropanoid F5H/CYP84A medium borderline
genome_Dca58736.1 Phenylpropanoid F5H/CYP84A medium borderline
genome_Dca10306.1 Phenylpropanoid HCT medium pass
genome_Dca10307.1 Phenylpropanoid HCT medium pass
genome_Dca10308.1 Phenylpropanoid HCT medium pass
genome_Dca12708.1 Phenylpropanoid HCT medium pass
genome_Dca16860.1 Phenylpropanoid HCT medium pass
genome_Dca19204.1 Phenylpropanoid HCT medium pass
genome_Dca26792.1 Phenylpropanoid HCT low borderline
genome_Dca28774.1 Phenylpropanoid HCT low borderline
genome_Dca28935.1 Phenylpropanoid HCT medium pass
genome_Dca28937.1 Phenylpropanoid HCT medium pass
genome_Dca31642.1 Phenylpropanoid HCT medium pass
genome_Dca32387.1 Phenylpropanoid HCT low borderline
genome_Dca41229.1 Phenylpropanoid HCT medium pass
genome_Dca41408.1 Phenylpropanoid HCT medium pass
genome_Dca42129.1 Phenylpropanoid HCT medium pass
genome_Dca4247.1 Phenylpropanoid HCT low borderline
genome_Dca42618.1 Phenylpropanoid HCT medium pass