PlantSME Plant secondary metabolism enzyme database

Dianthus caryophyllus (dianthus_caryophyllus)

Imported from atlas release summary for Dianthus caryophyllus.

2090
Candidate Protein Records
1667
Pathway-Level Records
4142
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 483 20 BAHD (183) View species results
Phenylpropanoid pathway 402 12 POD (198) View species results
Alkaloid pathway 339 20 7DLGT (65) View species results
Flavonoid pathway 215 12 UFGT (138) View species results
Rosmarinic acid pathway 134 7 C4H (46) View species results
Steroid pathway 94 11 SMT1/SMT2/SMT3 (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1453 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
genome_Dca1472.1 Terpenoid DXR low borderline
genome_Dca17750.1 Terpenoid DXR low borderline
genome_Dca29374.1 Terpenoid DXR low borderline
genome_Dca30239.1 Terpenoid DXR low borderline
genome_Dca40878.1 Terpenoid DXR high pass
genome_Dca49693.1 Terpenoid DXR low borderline
genome_Dca55419.1 Terpenoid DXR low borderline
genome_Dca56123.1 Terpenoid DXR low borderline
genome_Dca60498.1 Terpenoid DXR low borderline
genome_Dca8338.1 Terpenoid DXR low borderline
genome_Dca28403.1 Terpenoid DXS medium pass
genome_Dca28404.1 Terpenoid DXS medium pass
genome_Dca51047.1 Terpenoid DXS low borderline
genome_Dca52559.1 Terpenoid DXS low borderline
genome_Dca57464.1 Terpenoid DXS medium pass
genome_Dca8346.1 Terpenoid DXS medium pass
genome_Dca12282.1 Terpenoid FPPS medium pass
genome_Dca29935.1 Terpenoid FPPS medium pass
genome_Dca32714.1 Terpenoid FPPS medium pass
genome_Dca41147.1 Terpenoid FPPS medium pass
genome_Dca46147.1 Terpenoid FPPS medium pass
genome_Dca47867.1 Terpenoid FPPS medium pass
genome_Dca51142.1 Terpenoid FPPS medium pass
genome_Dca57252.1 Terpenoid FPPS medium pass
genome_Dca57284.1 Terpenoid FPPS medium pass
genome_Dca5764.1 Terpenoid FPPS medium pass
genome_Dca853.1 Terpenoid FPPS medium pass
genome_Dca11960.1 Terpenoid GGPPS medium borderline
genome_Dca15566.1 Terpenoid GGPPS medium borderline
genome_Dca29907.1 Terpenoid GGPPS medium borderline
genome_Dca3140.1 Terpenoid GGPPS medium borderline
genome_Dca3830.1 Terpenoid GGPPS medium borderline
genome_Dca45912.1 Terpenoid GGPPS medium borderline
genome_Dca45997.1 Terpenoid GGPPS medium borderline
genome_Dca55715.1 Terpenoid GGPPS medium borderline
genome_Dca26013.1 Terpenoid GPPS medium borderline
genome_Dca3831.1 Terpenoid GPPS medium pass
genome_Dca8905.1 Terpenoid HDR/IspH high pass
genome_Dca61787.1 Terpenoid HDS/IspG medium pass
genome_Dca61788.1 Terpenoid HDS/IspG high pass
genome_Dca13997.1 Terpenoid HMGR medium pass
genome_Dca2794.1 Terpenoid HMGR medium pass
genome_Dca47843.1 Terpenoid HMGR medium pass
genome_Dca59150.1 Terpenoid HMGR medium pass
genome_Dca1754.1 Terpenoid HMGS low borderline
genome_Dca23358.1 Terpenoid HMGS high pass
genome_Dca30728.1 Terpenoid HMGS high pass
genome_Dca38533.1 Terpenoid HMGS medium pass
genome_Dca50610.1 Terpenoid IDI low borderline
genome_Dca51963.1 Terpenoid IDI medium pass