PlantSME Plant secondary metabolism enzyme database

Dianthus caryophyllus (dianthus_caryophyllus)

Imported from atlas release summary for Dianthus caryophyllus.

2090
Candidate Protein Records
1667
Pathway-Level Records
4142
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 483 20 BAHD (183) View species results
Phenylpropanoid pathway 402 12 POD (198) View species results
Alkaloid pathway 339 20 7DLGT (65) View species results
Flavonoid pathway 215 12 UFGT (138) View species results
Rosmarinic acid pathway 134 7 C4H (46) View species results
Steroid pathway 94 11 SMT1/SMT2/SMT3 (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1453 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
genome_Dca57676.1 Alkaloid IO low borderline
genome_Dca59899.1 Alkaloid IO medium borderline
genome_Dca46927.1 Alkaloid ISY medium pass
genome_Dca473.1 Alkaloid ISY medium pass
genome_Dca54986.1 Alkaloid ISY medium pass
genome_Dca59407.1 Alkaloid ISY medium pass
genome_Dca13482.1 Alkaloid LAMT low borderline
genome_Dca16855.1 Alkaloid LAMT medium borderline
genome_Dca16855.2 Alkaloid LAMT medium borderline
genome_Dca17224.1 Alkaloid LAMT low borderline
genome_Dca27775.1 Alkaloid LAMT medium borderline
genome_Dca2941.1 Alkaloid LAMT low borderline
genome_Dca36244.1 Alkaloid LAMT medium borderline
genome_Dca4327.1 Alkaloid LAMT medium borderline
genome_Dca44989.1 Alkaloid LAMT low borderline
genome_Dca45606.1 Alkaloid LAMT low borderline
genome_Dca48342.1 Alkaloid LAMT low borderline
genome_Dca56800.1 Alkaloid LAMT medium borderline
genome_Dca56800.2 Alkaloid LAMT medium borderline
genome_Dca56803.1 Alkaloid LAMT low borderline
genome_Dca58012.1 Alkaloid LAMT low borderline
genome_Dca59232.1 Alkaloid LAMT low borderline
genome_Dca15870.1 Alkaloid MPO medium pass
genome_Dca22073.1 Alkaloid MPO high pass
genome_Dca27749.1 Alkaloid MPO medium pass
genome_Dca27969.1 Alkaloid MPO medium pass
genome_Dca35920.1 Alkaloid MPO high pass
genome_Dca42989.1 Alkaloid MPO high pass
genome_Dca56308.1 Alkaloid MPO medium pass
genome_Dca15944.1 Alkaloid NCS medium borderline
genome_Dca18937.1 Alkaloid NCS medium borderline
genome_Dca2328.1 Alkaloid NCS medium borderline
genome_Dca26206.1 Alkaloid NCS medium borderline
genome_Dca28056.1 Alkaloid NCS medium borderline
genome_Dca28578.1 Alkaloid NCS medium borderline
genome_Dca29489.1 Alkaloid NCS medium pass
genome_Dca32916.1 Alkaloid NCS medium borderline
genome_Dca50436.1 Alkaloid NCS medium borderline
genome_Dca53377.1 Alkaloid NCS medium borderline
genome_Dca55724.1 Alkaloid NCS medium borderline
genome_Dca55728.1 Alkaloid NCS medium borderline
genome_Dca59452.1 Alkaloid NCS medium borderline
genome_Dca11755.1 Alkaloid NMT medium borderline
genome_Dca12196.1 Alkaloid NMT medium borderline
genome_Dca12461.1 Alkaloid NMT medium pass
genome_Dca1277.1 Alkaloid NMT medium pass
genome_Dca13169.1 Alkaloid NMT low borderline
genome_Dca14206.1 Alkaloid NMT medium borderline
genome_Dca14213.1 Alkaloid NMT medium pass
genome_Dca16783.1 Alkaloid NMT medium pass