PlantSME Plant secondary metabolism enzyme database

Dianthus caryophyllus (dianthus_caryophyllus)

Imported from atlas release summary for Dianthus caryophyllus.

2090
Candidate Protein Records
1667
Pathway-Level Records
4142
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 483 20 BAHD (183) View species results
Phenylpropanoid pathway 402 12 POD (198) View species results
Alkaloid pathway 339 20 7DLGT (65) View species results
Flavonoid pathway 215 12 UFGT (138) View species results
Rosmarinic acid pathway 134 7 C4H (46) View species results
Steroid pathway 94 11 SMT1/SMT2/SMT3 (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1453 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
genome_Dca59090.1 Flavonoid IFS medium borderline
genome_Dca59092.1 Flavonoid IFS low borderline
genome_Dca59833.1 Flavonoid IFS low borderline
genome_Dca60402.1 Flavonoid IFS medium pass
genome_Dca6055.1 Flavonoid IFS low borderline
genome_Dca60695.1 Flavonoid IFS medium borderline
genome_Dca6114.1 Flavonoid IFS low borderline
genome_Dca61526.1 Flavonoid IFS low borderline
genome_Dca61873.1 Flavonoid IFS medium borderline
genome_Dca6194.1 Flavonoid IFS medium borderline
genome_Dca62.1 Flavonoid IFS low borderline
genome_Dca62130.1 Flavonoid IFS medium borderline
genome_Dca62132.1 Flavonoid IFS medium borderline
genome_Dca62445.1 Flavonoid IFS medium borderline
genome_Dca62447.1 Flavonoid IFS medium borderline
genome_Dca62449.1 Flavonoid IFS medium borderline
genome_Dca6381.1 Flavonoid IFS medium borderline
genome_Dca64.1 Flavonoid IFS low borderline
genome_Dca6520.1 Flavonoid IFS low borderline
genome_Dca6664.1 Flavonoid IFS low borderline
genome_Dca6713.1 Flavonoid IFS low borderline
genome_Dca68.1 Flavonoid IFS medium borderline
genome_Dca7925.1 Flavonoid IFS low borderline
genome_Dca8135.1 Flavonoid IFS medium borderline
genome_Dca9244.1 Flavonoid IFS low borderline
genome_Dca13751.1 Flavonoid PAL medium pass
genome_Dca2907.1 Flavonoid PAL low borderline
genome_Dca48763.1 Flavonoid PAL high pass
genome_Dca53691.1 Flavonoid PAL low borderline
genome_Dca54310.1 Flavonoid PAL high pass
genome_Dca57541.1 Flavonoid PAL high pass
genome_Dca10392.1 Flavonoid UFGT medium pass
genome_Dca11189.1 Flavonoid UFGT high pass
genome_Dca11914.1 Flavonoid UFGT medium pass
genome_Dca11919.1 Flavonoid UFGT medium pass
genome_Dca11921.1 Flavonoid UFGT low borderline
genome_Dca11979.1 Flavonoid UFGT high pass
genome_Dca13727.1 Flavonoid UFGT high pass
genome_Dca14000.1 Flavonoid UFGT medium pass
genome_Dca14546.1 Flavonoid UFGT low borderline
genome_Dca17573.1 Flavonoid UFGT high pass
genome_Dca17593.1 Flavonoid UFGT medium pass
genome_Dca17594.1 Flavonoid UFGT medium pass
genome_Dca17948.1 Flavonoid UFGT high pass
genome_Dca17949.1 Flavonoid UFGT medium pass
genome_Dca17950.1 Flavonoid UFGT medium pass
genome_Dca17951.1 Flavonoid UFGT medium pass
genome_Dca17952.1 Flavonoid UFGT medium pass
genome_Dca18626.1 Flavonoid UFGT medium pass
genome_Dca18846.1 Flavonoid UFGT high pass