PlantSME Plant secondary metabolism enzyme database

Dianthus caryophyllus (dianthus_caryophyllus)

Imported from atlas release summary for Dianthus caryophyllus.

1667
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 483 20 BAHD (183) View species results
Phenylpropanoid pathway 402 12 POD (198) View species results
Alkaloid pathway 339 20 7DLGT (65) View species results
Flavonoid pathway 215 12 UFGT (138) View species results
Rosmarinic acid pathway 134 7 C4H (46) View species results
Steroid pathway 94 11 SMT1/SMT2/SMT3 (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1453 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
Reset
Gene Pathway Family Confidence Status
genome_Dca8902.1 Flavonoid 4CL low borderline
genome_Dca12015.1 Flavonoid ANR low borderline
genome_Dca15922.1 Flavonoid ANR medium borderline
genome_Dca16480.1 Flavonoid ANR medium borderline
genome_Dca18650.1 Flavonoid ANR medium borderline
genome_Dca27434.1 Flavonoid ANR medium borderline
genome_Dca27436.1 Flavonoid ANR medium pass
genome_Dca28202.1 Flavonoid ANR medium borderline
genome_Dca28203.1 Flavonoid ANR medium borderline
genome_Dca28588.1 Flavonoid ANR medium borderline
genome_Dca29996.1 Flavonoid ANR medium borderline
genome_Dca38603.1 Flavonoid ANR low borderline
genome_Dca40303.1 Flavonoid ANR medium borderline
genome_Dca40304.1 Flavonoid ANR medium borderline
genome_Dca40343.1 Flavonoid ANR low borderline
genome_Dca41026.1 Flavonoid ANR medium borderline
genome_Dca42832.1 Flavonoid ANR medium borderline
genome_Dca4324.1 Flavonoid ANR medium borderline
genome_Dca4659.1 Flavonoid ANR medium pass
genome_Dca467.1 Flavonoid ANR medium borderline
genome_Dca468.1 Flavonoid ANR medium borderline
genome_Dca469.1 Flavonoid ANR medium borderline
genome_Dca470.1 Flavonoid ANR medium borderline
genome_Dca471.1 Flavonoid ANR medium borderline
genome_Dca48593.1 Flavonoid ANR medium borderline
genome_Dca51887.1 Flavonoid ANR low borderline
genome_Dca54988.1 Flavonoid ANR medium borderline
genome_Dca54990.1 Flavonoid ANR medium borderline
genome_Dca54991.1 Flavonoid ANR medium borderline
genome_Dca56886.1 Flavonoid ANR medium borderline
genome_Dca57776.1 Flavonoid ANR medium borderline
genome_Dca58848.1 Flavonoid ANR medium borderline
genome_Dca59456.1 Flavonoid ANR medium borderline
genome_Dca61457.1 Flavonoid ANR low borderline
genome_Dca15929.1 Flavonoid ANS/LDOX medium borderline
genome_Dca15966.1 Flavonoid ANS/LDOX low borderline
genome_Dca16791.1 Flavonoid ANS/LDOX medium borderline
genome_Dca20259.1 Flavonoid ANS/LDOX medium borderline
genome_Dca21048.1 Flavonoid ANS/LDOX medium pass
genome_Dca2328.1 Flavonoid ANS/LDOX medium borderline
genome_Dca26389.1 Flavonoid ANS/LDOX medium borderline
genome_Dca28578.1 Flavonoid ANS/LDOX medium pass
genome_Dca28617.1 Flavonoid ANS/LDOX medium borderline
genome_Dca30868.1 Flavonoid ANS/LDOX medium borderline
genome_Dca41528.1 Flavonoid ANS/LDOX medium borderline
genome_Dca43351.1 Flavonoid ANS/LDOX low borderline
genome_Dca52845.1 Flavonoid ANS/LDOX medium borderline
genome_Dca57204.1 Flavonoid ANS/LDOX medium borderline
genome_Dca12289.1 Flavonoid C4H medium borderline
genome_Dca12311.1 Flavonoid C4H medium borderline