PlantSME Plant secondary metabolism enzyme database

Dianthus caryophyllus (dianthus_caryophyllus)

Imported from atlas release summary for Dianthus caryophyllus.

2090
Candidate Protein Records
1667
Pathway-Level Records
4142
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 483 20 BAHD (183) View species results
Phenylpropanoid pathway 402 12 POD (198) View species results
Alkaloid pathway 339 20 7DLGT (65) View species results
Flavonoid pathway 215 12 UFGT (138) View species results
Rosmarinic acid pathway 134 7 C4H (46) View species results
Steroid pathway 94 11 SMT1/SMT2/SMT3 (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1453 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
genome_Dca18537.1 Alkaloid T3O low borderline
genome_Dca18820.1 Alkaloid T3O medium borderline
genome_Dca19144.1 Alkaloid T3O medium borderline
genome_Dca19146.1 Alkaloid T3O medium borderline
genome_Dca19212.1 Alkaloid T3O medium borderline
genome_Dca19224.1 Alkaloid T3O medium borderline
genome_Dca19800.1 Alkaloid T3O medium borderline
genome_Dca19861.1 Alkaloid T3O medium borderline
genome_Dca22367.1 Alkaloid T3O medium pass
genome_Dca23029.1 Alkaloid T3O low borderline
genome_Dca23352.1 Alkaloid T3O low borderline
genome_Dca23505.1 Alkaloid T3O medium pass
genome_Dca23611.1 Alkaloid T3O medium borderline
genome_Dca23612.1 Alkaloid T3O medium borderline
genome_Dca23613.1 Alkaloid T3O medium borderline
genome_Dca23614.1 Alkaloid T3O medium borderline
genome_Dca23616.1 Alkaloid T3O medium borderline
genome_Dca24251.1 Alkaloid T3O medium borderline
genome_Dca24738.1 Alkaloid T3O medium pass
genome_Dca24769.1 Alkaloid T3O medium pass
genome_Dca26293.1 Alkaloid T3O medium borderline
genome_Dca26294.1 Alkaloid T3O medium borderline
genome_Dca26546.1 Alkaloid T3O medium pass
genome_Dca27258.1 Alkaloid T3O medium pass
genome_Dca2757.1 Alkaloid T3O medium pass
genome_Dca27717.1 Alkaloid T3O medium pass
genome_Dca27971.1 Alkaloid T3O medium borderline
genome_Dca2864.1 Alkaloid T3O medium borderline
genome_Dca2866.1 Alkaloid T3O medium borderline
genome_Dca30174.1 Alkaloid T3O medium borderline
genome_Dca30175.1 Alkaloid T3O medium borderline
genome_Dca30309.1 Alkaloid T3O low borderline
genome_Dca30574.1 Alkaloid T3O medium pass
genome_Dca31168.1 Alkaloid T3O medium pass
genome_Dca32051.1 Alkaloid T3O medium pass
genome_Dca32079.1 Alkaloid T3O medium borderline
genome_Dca32280.1 Alkaloid T3O medium borderline
genome_Dca32601.1 Alkaloid T3O medium borderline
genome_Dca32662.1 Alkaloid T3O medium borderline
genome_Dca33424.1 Alkaloid T3O medium borderline
genome_Dca33671.1 Alkaloid T3O medium pass
genome_Dca34093.1 Alkaloid T3O low borderline
genome_Dca3593.1 Alkaloid T3O low borderline
genome_Dca35979.1 Alkaloid T3O low borderline
genome_Dca37618.1 Alkaloid T3O medium borderline
genome_Dca3865.1 Alkaloid T3O low borderline
genome_Dca41038.1 Alkaloid T3O medium borderline
genome_Dca41435.1 Alkaloid T3O high pass
genome_Dca42414.1 Alkaloid T3O medium borderline
genome_Dca42416.1 Alkaloid T3O medium borderline