PlantSME Plant secondary metabolism enzyme database

Dianthus caryophyllus (dianthus_caryophyllus)

Imported from atlas release summary for Dianthus caryophyllus.

1667
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 483 20 BAHD (183) View species results
Phenylpropanoid pathway 402 12 POD (198) View species results
Alkaloid pathway 339 20 7DLGT (65) View species results
Flavonoid pathway 215 12 UFGT (138) View species results
Rosmarinic acid pathway 134 7 C4H (46) View species results
Steroid pathway 94 11 SMT1/SMT2/SMT3 (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1453 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
Reset
Gene Pathway Family Confidence Status
genome_Dca54103.1 Steroid CYP90D1 medium borderline
genome_Dca55195.1 Steroid CYP90D1 low borderline
genome_Dca55196.1 Steroid CYP90D1 low borderline
genome_Dca56409.1 Steroid CYP90D1 low borderline
genome_Dca57269.1 Steroid CYP90D1 medium borderline
genome_Dca57676.1 Steroid CYP90D1 medium borderline
genome_Dca59089.1 Steroid CYP90D1 low borderline
genome_Dca59090.1 Steroid CYP90D1 low borderline
genome_Dca6114.1 Steroid CYP90D1 medium borderline
genome_Dca6395.1 Steroid CYP90D1 low borderline
genome_Dca70.1 Steroid CYP90D1 low borderline
genome_Dca8135.1 Steroid CYP90D1 low borderline
genome_Dca9244.1 Steroid CYP90D1 medium borderline
genome_Dca14973.1 Steroid DET2 low borderline
genome_Dca17201.1 Steroid DET2 low borderline
genome_Dca17201.2 Steroid DET2 low borderline
genome_Dca29270.1 Steroid DET2 low borderline
genome_Dca41096.1 Steroid DET2 low borderline
genome_Dca42129.1 Steroid DET2 low borderline
genome_Dca44628.1 Steroid DET2 low borderline
genome_Dca47935.1 Steroid DET2 low borderline
genome_Dca50629.1 Steroid DET2 low borderline
genome_Dca11085.1 Steroid DWF1 medium pass
genome_Dca1131.1 Steroid DWF1 medium pass
genome_Dca24546.1 Steroid DWF1 low borderline
genome_Dca33626.1 Steroid DWF1 medium pass
genome_Dca54888.1 Steroid DWF1 medium pass
genome_Dca56379.1 Steroid DWF1 medium pass
genome_Dca10101.1 Steroid DWF4/CYP90B1 low borderline
genome_Dca1073.1 Steroid DWF4/CYP90B1 low borderline
genome_Dca11182.1 Steroid DWF4/CYP90B1 low borderline
genome_Dca11696.1 Steroid DWF4/CYP90B1 low borderline
genome_Dca11955.1 Steroid DWF4/CYP90B1 low borderline
genome_Dca11957.1 Steroid DWF4/CYP90B1 low borderline
genome_Dca12194.1 Steroid DWF4/CYP90B1 low borderline
genome_Dca12312.1 Steroid DWF4/CYP90B1 low borderline
genome_Dca12315.1 Steroid DWF4/CYP90B1 low borderline
genome_Dca12318.1 Steroid DWF4/CYP90B1 low borderline
genome_Dca12320.1 Steroid DWF4/CYP90B1 low borderline
genome_Dca13127.1 Steroid DWF4/CYP90B1 low borderline
genome_Dca14611.1 Steroid DWF4/CYP90B1 medium borderline
genome_Dca1479.1 Steroid DWF4/CYP90B1 low borderline
genome_Dca1481.1 Steroid DWF4/CYP90B1 low borderline
genome_Dca16553.1 Steroid DWF4/CYP90B1 low borderline
genome_Dca16740.1 Steroid DWF4/CYP90B1 low borderline
genome_Dca18537.1 Steroid DWF4/CYP90B1 medium borderline
genome_Dca19144.1 Steroid DWF4/CYP90B1 low borderline
genome_Dca19146.1 Steroid DWF4/CYP90B1 low borderline
genome_Dca19212.1 Steroid DWF4/CYP90B1 low borderline
genome_Dca19800.1 Steroid DWF4/CYP90B1 low borderline