PlantSME Plant secondary metabolism enzyme database

Dianthus caryophyllus (dianthus_caryophyllus)

Imported from atlas release summary for Dianthus caryophyllus.

2090
Candidate Protein Records
1667
Pathway-Level Records
4142
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 483 20 BAHD (183) View species results
Phenylpropanoid pathway 402 12 POD (198) View species results
Alkaloid pathway 339 20 7DLGT (65) View species results
Flavonoid pathway 215 12 UFGT (138) View species results
Rosmarinic acid pathway 134 7 C4H (46) View species results
Steroid pathway 94 11 SMT1/SMT2/SMT3 (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1453 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
genome_Dca9266.1 Terpenoid BAHD medium pass
genome_Dca9453.1 Terpenoid BAHD medium pass
genome_Dca9921.1 Terpenoid BAHD medium pass
genome_Dca25928.1 Terpenoid CMK/IspE high pass
genome_Dca8183.1 Terpenoid CMK/IspE low borderline
genome_Dca10664.1 Terpenoid CYP71 medium pass
genome_Dca1069.1 Terpenoid CYP71 medium borderline
genome_Dca1070.1 Terpenoid CYP71 medium borderline
genome_Dca1072.1 Terpenoid CYP71 medium borderline
genome_Dca1073.1 Terpenoid CYP71 medium borderline
genome_Dca1074.1 Terpenoid CYP71 medium borderline
genome_Dca1075.1 Terpenoid CYP71 medium borderline
genome_Dca12194.1 Terpenoid CYP71 medium borderline
genome_Dca13260.1 Terpenoid CYP71 medium pass
genome_Dca15641.1 Terpenoid CYP71 low borderline
genome_Dca15648.1 Terpenoid CYP71 low borderline
genome_Dca18337.1 Terpenoid CYP71 medium pass
genome_Dca19134.1 Terpenoid CYP71 medium pass
genome_Dca21078.1 Terpenoid CYP71 medium pass
genome_Dca22664.1 Terpenoid CYP71 medium pass
genome_Dca23616.1 Terpenoid CYP71 medium borderline
genome_Dca26046.1 Terpenoid CYP71 low borderline
genome_Dca27026.1 Terpenoid CYP71 medium pass
genome_Dca33804.1 Terpenoid CYP71 medium pass
genome_Dca35361.1 Terpenoid CYP71 medium pass
genome_Dca37618.1 Terpenoid CYP71 medium borderline
genome_Dca39562.1 Terpenoid CYP71 medium pass
genome_Dca3974.1 Terpenoid CYP71 medium pass
genome_Dca41601.1 Terpenoid CYP71 low borderline
genome_Dca43631.1 Terpenoid CYP71 low borderline
genome_Dca43998.1 Terpenoid CYP71 medium pass
genome_Dca44282.1 Terpenoid CYP71 medium pass
genome_Dca4566.1 Terpenoid CYP71 low borderline
genome_Dca47205.1 Terpenoid CYP71 medium borderline
genome_Dca48163.1 Terpenoid CYP71 medium pass
genome_Dca48212.1 Terpenoid CYP71 medium pass
genome_Dca51358.1 Terpenoid CYP71 medium pass
genome_Dca52259.1 Terpenoid CYP71 medium borderline
genome_Dca52260.1 Terpenoid CYP71 medium borderline
genome_Dca56409.1 Terpenoid CYP71 medium borderline
genome_Dca56410.1 Terpenoid CYP71 medium borderline
genome_Dca56411.1 Terpenoid CYP71 medium borderline
genome_Dca56413.1 Terpenoid CYP71 medium borderline
genome_Dca56418.1 Terpenoid CYP71 medium borderline
genome_Dca6242.1 Terpenoid CYP71 medium pass
genome_Dca6381.1 Terpenoid CYP71 medium borderline
genome_Dca6403.1 Terpenoid CYP71 low borderline
genome_Dca6711.1 Terpenoid CYP71 medium borderline
genome_Dca7296.1 Terpenoid CYP71 medium borderline
genome_Dca8135.1 Terpenoid CYP71 medium borderline