PlantSME Plant secondary metabolism enzyme database

Dianthus caryophyllus (dianthus_caryophyllus)

Imported from atlas release summary for Dianthus caryophyllus.

2090
Candidate Protein Records
1667
Pathway-Level Records
4142
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 483 20 BAHD (183) View species results
Phenylpropanoid pathway 402 12 POD (198) View species results
Alkaloid pathway 339 20 7DLGT (65) View species results
Flavonoid pathway 215 12 UFGT (138) View species results
Rosmarinic acid pathway 134 7 C4H (46) View species results
Steroid pathway 94 11 SMT1/SMT2/SMT3 (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1453 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
genome_Dca220.1 Alkaloid COR medium pass
genome_Dca221.1 Alkaloid COR low borderline
genome_Dca33503.1 Alkaloid COR medium pass
genome_Dca33504.1 Alkaloid COR medium pass
genome_Dca35756.1 Alkaloid COR low borderline
genome_Dca40782.1 Alkaloid COR medium pass
genome_Dca43719.1 Alkaloid COR medium pass
genome_Dca45468.1 Alkaloid COR medium pass
genome_Dca48260.1 Alkaloid COR medium pass
genome_Dca61101.1 Alkaloid COR medium pass
genome_Dca8198.1 Alkaloid COR medium pass
genome_Dca9254.1 Alkaloid COR medium pass
genome_Dca9255.1 Alkaloid COR medium pass
genome_Dca19058.1 Alkaloid CYP719 medium borderline
genome_Dca40491.1 Alkaloid CYP719 medium borderline
genome_Dca48125.1 Alkaloid CYP719 medium borderline
genome_Dca6395.1 Alkaloid CYP719 medium borderline
genome_Dca12316.1 Alkaloid CYP80B1 medium borderline
genome_Dca1583.1 Alkaloid CYP80B1 medium borderline
genome_Dca25664.1 Alkaloid CYP80B1 medium borderline
genome_Dca42603.1 Alkaloid CYP80B1 low borderline
genome_Dca59031.1 Alkaloid CYP80B1 medium borderline
genome_Dca60402.1 Alkaloid CYP80B1 medium borderline
genome_Dca62132.1 Alkaloid CYP80B1 medium borderline
genome_Dca11182.1 Alkaloid G8O/G8H medium borderline
genome_Dca19140.1 Alkaloid G8O/G8H medium borderline
genome_Dca23375.1 Alkaloid G8O/G8H low borderline
genome_Dca23376.1 Alkaloid G8O/G8H medium borderline
genome_Dca24136.1 Alkaloid G8O/G8H medium borderline
genome_Dca27121.1 Alkaloid G8O/G8H medium borderline
genome_Dca27801.1 Alkaloid G8O/G8H medium borderline
genome_Dca27802.1 Alkaloid G8O/G8H medium borderline
genome_Dca27970.1 Alkaloid G8O/G8H low borderline
genome_Dca31949.1 Alkaloid G8O/G8H medium borderline
genome_Dca35452.1 Alkaloid G8O/G8H medium borderline
genome_Dca41037.1 Alkaloid G8O/G8H medium borderline
genome_Dca41040.1 Alkaloid G8O/G8H medium borderline
genome_Dca42105.1 Alkaloid G8O/G8H medium borderline
genome_Dca42417.1 Alkaloid G8O/G8H low borderline
genome_Dca45331.1 Alkaloid G8O/G8H medium borderline
genome_Dca53920.1 Alkaloid G8O/G8H medium borderline
genome_Dca53921.1 Alkaloid G8O/G8H medium borderline
genome_Dca54352.1 Alkaloid G8O/G8H low borderline
genome_Dca54354.1 Alkaloid G8O/G8H medium borderline
genome_Dca5480.1 Alkaloid G8O/G8H medium borderline
genome_Dca55195.1 Alkaloid G8O/G8H medium borderline
genome_Dca56412.1 Alkaloid G8O/G8H medium borderline
genome_Dca56418.1 Alkaloid G8O/G8H medium borderline
genome_Dca57283.1 Alkaloid G8O/G8H medium borderline
genome_Dca61526.1 Alkaloid G8O/G8H medium borderline