PlantSME Plant secondary metabolism enzyme database

Dianthus caryophyllus (dianthus_caryophyllus)

Imported from atlas release summary for Dianthus caryophyllus.

2090
Candidate Protein Records
1667
Pathway-Level Records
4142
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 483 20 BAHD (183) View species results
Phenylpropanoid pathway 402 12 POD (198) View species results
Alkaloid pathway 339 20 7DLGT (65) View species results
Flavonoid pathway 215 12 UFGT (138) View species results
Rosmarinic acid pathway 134 7 C4H (46) View species results
Steroid pathway 94 11 SMT1/SMT2/SMT3 (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1453 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
genome_Dca69.1 Alkaloid G8O/G8H medium borderline
genome_Dca70.1 Alkaloid G8O/G8H medium borderline
genome_Dca15600.1 Alkaloid GES medium pass
genome_Dca16160.1 Alkaloid GES medium pass
genome_Dca18653.1 Alkaloid GES medium pass
genome_Dca18654.1 Alkaloid GES medium pass
genome_Dca18655.1 Alkaloid GES medium pass
genome_Dca19517.1 Alkaloid GES medium pass
genome_Dca19518.1 Alkaloid GES medium pass
genome_Dca19862.1 Alkaloid GES medium pass
genome_Dca2301.1 Alkaloid GES medium pass
genome_Dca30863.1 Alkaloid GES low borderline
genome_Dca32881.1 Alkaloid GES medium pass
genome_Dca3608.1 Alkaloid GES medium pass
genome_Dca3609.1 Alkaloid GES medium pass
genome_Dca38959.1 Alkaloid GES medium pass
genome_Dca39938.1 Alkaloid GES medium pass
genome_Dca42012.1 Alkaloid GES low borderline
genome_Dca42408.1 Alkaloid GES low borderline
genome_Dca45349.1 Alkaloid GES medium pass
genome_Dca49377.1 Alkaloid GES low borderline
genome_Dca50121.1 Alkaloid GES low borderline
genome_Dca50122.1 Alkaloid GES medium pass
genome_Dca50123.1 Alkaloid GES medium pass
genome_Dca50124.1 Alkaloid GES low borderline
genome_Dca50125.1 Alkaloid GES low borderline
genome_Dca50126.1 Alkaloid GES medium pass
genome_Dca50127.1 Alkaloid GES medium pass
genome_Dca50128.1 Alkaloid GES medium pass
genome_Dca50129.1 Alkaloid GES medium pass
genome_Dca50131.1 Alkaloid GES medium pass
genome_Dca50132.1 Alkaloid GES medium pass
genome_Dca51914.1 Alkaloid GES medium pass
genome_Dca51915.1 Alkaloid GES medium pass
genome_Dca53748.1 Alkaloid GES medium pass
genome_Dca54030.1 Alkaloid GES medium pass
genome_Dca5881.1 Alkaloid GES medium pass
genome_Dca6062.1 Alkaloid GES low borderline
genome_Dca12269.1 Alkaloid GS low borderline
genome_Dca13331.1 Alkaloid GS low borderline
genome_Dca21787.1 Alkaloid GS low borderline
genome_Dca22747.1 Alkaloid GS low borderline
genome_Dca24907.1 Alkaloid GS high pass
genome_Dca26319.1 Alkaloid GS low borderline
genome_Dca26908.1 Alkaloid GS high pass
genome_Dca26911.1 Alkaloid GS high pass
genome_Dca28071.1 Alkaloid GS medium pass
genome_Dca35554.1 Alkaloid GS medium pass
genome_Dca35555.1 Alkaloid GS high pass
genome_Dca36078.1 Alkaloid GS low borderline