PlantSME Plant secondary metabolism enzyme database

Dianthus caryophyllus (dianthus_caryophyllus)

Imported from atlas release summary for Dianthus caryophyllus.

2090
Candidate Protein Records
1667
Pathway-Level Records
4142
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 483 20 BAHD (183) View species results
Phenylpropanoid pathway 402 12 POD (198) View species results
Alkaloid pathway 339 20 7DLGT (65) View species results
Flavonoid pathway 215 12 UFGT (138) View species results
Rosmarinic acid pathway 134 7 C4H (46) View species results
Steroid pathway 94 11 SMT1/SMT2/SMT3 (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1453 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
genome_Dca56438.1 Phenylpropanoid CAD low borderline
genome_Dca56439.1 Phenylpropanoid CAD low borderline
genome_Dca56520.1 Phenylpropanoid CAD low borderline
genome_Dca57776.1 Phenylpropanoid CAD medium borderline
genome_Dca57857.1 Phenylpropanoid CAD medium pass
genome_Dca59456.1 Phenylpropanoid CAD medium borderline
genome_Dca59457.1 Phenylpropanoid CAD medium borderline
genome_Dca60590.1 Phenylpropanoid CAD medium pass
genome_Dca60618.1 Phenylpropanoid CAD medium pass
genome_Dca10240.1 Phenylpropanoid CCR low borderline
genome_Dca10242.1 Phenylpropanoid CCR low borderline
genome_Dca14209.1 Phenylpropanoid CCR medium borderline
genome_Dca15752.1 Phenylpropanoid CCR medium pass
genome_Dca15922.1 Phenylpropanoid CCR medium pass
genome_Dca16480.1 Phenylpropanoid CCR low borderline
genome_Dca16934.1 Phenylpropanoid CCR medium borderline
genome_Dca20492.1 Phenylpropanoid CCR medium pass
genome_Dca29996.1 Phenylpropanoid CCR medium borderline
genome_Dca41026.1 Phenylpropanoid CCR medium borderline
genome_Dca4324.1 Phenylpropanoid CCR medium borderline
genome_Dca46160.1 Phenylpropanoid CCR low borderline
genome_Dca48593.1 Phenylpropanoid CCR medium borderline
genome_Dca49629.1 Phenylpropanoid CCR medium pass
genome_Dca50898.1 Phenylpropanoid CCR medium borderline
genome_Dca50899.1 Phenylpropanoid CCR medium pass
genome_Dca51617.1 Phenylpropanoid CCR low borderline
genome_Dca52558.1 Phenylpropanoid CCR medium pass
genome_Dca53135.1 Phenylpropanoid CCR low borderline
genome_Dca54160.1 Phenylpropanoid CCR medium borderline
genome_Dca56886.1 Phenylpropanoid CCR medium borderline
genome_Dca58848.1 Phenylpropanoid CCR medium borderline
genome_Dca61079.1 Phenylpropanoid CCR medium borderline
genome_Dca17069.1 Phenylpropanoid CCoAOMT medium pass
genome_Dca17070.1 Phenylpropanoid CCoAOMT medium pass
genome_Dca20795.1 Phenylpropanoid CCoAOMT medium pass
genome_Dca43766.1 Phenylpropanoid CCoAOMT medium pass
genome_Dca49547.1 Phenylpropanoid CCoAOMT medium pass
genome_Dca11125.1 Phenylpropanoid COMT medium pass
genome_Dca14199.1 Phenylpropanoid COMT low borderline
genome_Dca14199.2 Phenylpropanoid COMT low borderline
genome_Dca14206.1 Phenylpropanoid COMT low borderline
genome_Dca14878.1 Phenylpropanoid COMT medium pass
genome_Dca14882.1 Phenylpropanoid COMT medium pass
genome_Dca14884.1 Phenylpropanoid COMT medium pass
genome_Dca16411.1 Phenylpropanoid COMT medium pass
genome_Dca22856.1 Phenylpropanoid COMT medium pass
genome_Dca24344.1 Phenylpropanoid COMT medium pass
genome_Dca27054.1 Phenylpropanoid COMT low borderline
genome_Dca30112.1 Phenylpropanoid COMT medium pass
genome_Dca3118.1 Phenylpropanoid COMT low borderline