PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

5872
Candidate Protein Records
4696
Pathway-Level Records
11761
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Protein/Isoform Record Pathway Family Confidence Status
GtomD05G0020670.1 Rosmarinic Acid C4H medium pass
GtomD05G0021500.1 Rosmarinic Acid C4H low borderline
GtomD05G0021500.2 Rosmarinic Acid C4H low borderline
GtomD05G0021500.3 Rosmarinic Acid C4H low borderline
GtomD05G0021770.1 Rosmarinic Acid C4H low borderline
GtomD05G0021780.1 Rosmarinic Acid C4H medium pass
GtomD05G0021790.1 Rosmarinic Acid C4H low borderline
GtomD05G0021810.1 Rosmarinic Acid C4H low borderline
GtomD05G0021820.1 Rosmarinic Acid C4H medium pass
GtomD05G0021830.1 Rosmarinic Acid C4H low borderline
GtomD05G0021840.1 Rosmarinic Acid C4H low borderline
GtomD05G0021880.1 Rosmarinic Acid C4H medium pass
GtomD05G0022310.1 Rosmarinic Acid C4H low borderline
GtomD05G0022830.1 Rosmarinic Acid C4H low borderline
GtomD05G0022880.1 Rosmarinic Acid C4H medium pass
GtomD05G0028950.1 Rosmarinic Acid C4H medium pass
GtomD05G0029180.1 Rosmarinic Acid C4H low borderline
GtomD05G0031070.1 Rosmarinic Acid C4H low borderline
GtomD05G0032740.1 Rosmarinic Acid C4H medium pass
GtomD05G0034960.1 Rosmarinic Acid C4H low borderline
GtomD05G0038650.1 Rosmarinic Acid C4H medium pass
GtomD05G0038670.1 Rosmarinic Acid C4H medium pass
GtomD05G0038680.1 Rosmarinic Acid C4H low borderline
GtomD05G0042740.1 Rosmarinic Acid C4H low borderline
GtomD05G0042750.1 Rosmarinic Acid C4H medium pass
GtomD05G0042770.1 Rosmarinic Acid C4H low borderline
GtomD05G0042810.1 Rosmarinic Acid C4H medium pass
GtomD06G0001030.2 Rosmarinic Acid C4H low borderline
GtomD06G0001770.1 Rosmarinic Acid C4H low borderline
GtomD06G0001780.1 Rosmarinic Acid C4H low borderline
GtomD06G0001790.1 Rosmarinic Acid C4H low borderline
GtomD06G0001800.1 Rosmarinic Acid C4H low borderline
GtomD06G0001810.1 Rosmarinic Acid C4H low borderline
GtomD06G0001820.1 Rosmarinic Acid C4H low borderline
GtomD06G0001830.1 Rosmarinic Acid C4H low borderline
GtomD06G0001840.1 Rosmarinic Acid C4H low borderline
GtomD06G0001850.1 Rosmarinic Acid C4H low borderline
GtomD06G0001900.1 Rosmarinic Acid C4H low borderline
GtomD06G0002770.1 Rosmarinic Acid C4H medium pass
GtomD06G0007220.1 Rosmarinic Acid C4H low borderline
GtomD06G0009710.1 Rosmarinic Acid C4H low borderline
GtomD06G0014370.1 Rosmarinic Acid C4H low borderline
GtomD06G0018030.1 Rosmarinic Acid C4H low borderline
GtomD06G0019540.1 Rosmarinic Acid C4H low borderline
GtomD06G0020850.1 Rosmarinic Acid C4H low borderline
GtomD06G0020850.2 Rosmarinic Acid C4H low borderline
GtomD06G0021530.1 Rosmarinic Acid C4H low borderline
GtomD06G0023540.1 Rosmarinic Acid C4H low borderline
GtomD06G0026640.1 Rosmarinic Acid C4H low borderline
GtomD07G0000770.1 Rosmarinic Acid C4H low borderline