PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

5872
Candidate Protein Records
4696
Pathway-Level Records
11761
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
Reset
Protein/Isoform Record Pathway Family Confidence Status
GtomD07G0004960.1 Rosmarinic Acid C4H low borderline
GtomD07G0006600.1 Rosmarinic Acid C4H low borderline
GtomD07G0006630.1 Rosmarinic Acid C4H low borderline
GtomD07G0009200.1 Rosmarinic Acid C4H low borderline
GtomD07G0009200.2 Rosmarinic Acid C4H low borderline
GtomD07G0009210.1 Rosmarinic Acid C4H low borderline
GtomD07G0009350.1 Rosmarinic Acid C4H low borderline
GtomD07G0009350.2 Rosmarinic Acid C4H low borderline
GtomD07G0010800.1 Rosmarinic Acid C4H low borderline
GtomD07G0010810.1 Rosmarinic Acid C4H low borderline
GtomD07G0010820.1 Rosmarinic Acid C4H low borderline
GtomD07G0011600.1 Rosmarinic Acid C4H low borderline
GtomD07G0014080.1 Rosmarinic Acid C4H medium pass
GtomD07G0018820.1 Rosmarinic Acid C4H low borderline
GtomD07G0021860.1 Rosmarinic Acid C4H low borderline
GtomD07G0022340.1 Rosmarinic Acid C4H low borderline
GtomD07G0022720.1 Rosmarinic Acid C4H low borderline
GtomD07G0023260.1 Rosmarinic Acid C4H low borderline
GtomD07G0023280.1 Rosmarinic Acid C4H low borderline
GtomD07G0023290.1 Rosmarinic Acid C4H low borderline
GtomD07G0024970.1 Rosmarinic Acid C4H low borderline
GtomD08G0002100.1 Rosmarinic Acid C4H low borderline
GtomD08G0013830.1 Rosmarinic Acid C4H low borderline
GtomD08G0016190.1 Rosmarinic Acid C4H low borderline
GtomD08G0016190.2 Rosmarinic Acid C4H low borderline
GtomD08G0016750.1 Rosmarinic Acid C4H low borderline
GtomD08G0019150.1 Rosmarinic Acid C4H low borderline
GtomD08G0020220.1 Rosmarinic Acid C4H low borderline
GtomD08G0020250.1 Rosmarinic Acid C4H low borderline
GtomD08G0020250.2 Rosmarinic Acid C4H low borderline
GtomD08G0021810.1 Rosmarinic Acid C4H medium pass
GtomD08G0022080.1 Rosmarinic Acid C4H low borderline
GtomD08G0022090.1 Rosmarinic Acid C4H low borderline
GtomD08G0022100.1 Rosmarinic Acid C4H medium pass
GtomD08G0022110.1 Rosmarinic Acid C4H low borderline
GtomD08G0022120.1 Rosmarinic Acid C4H medium pass
GtomD08G0022120.2 Rosmarinic Acid C4H low borderline
GtomD08G0022160.1 Rosmarinic Acid C4H low borderline
GtomD08G0027510.1 Rosmarinic Acid C4H low borderline
GtomD08G0029080.1 Rosmarinic Acid C4H low borderline
GtomD08G0029080.2 Rosmarinic Acid C4H low borderline
GtomD08G0029850.1 Rosmarinic Acid C4H low borderline
GtomD09G0005860.1 Rosmarinic Acid C4H medium pass
GtomD09G0005870.1 Rosmarinic Acid C4H low borderline
GtomD09G0005890.1 Rosmarinic Acid C4H low borderline
GtomD09G0005910.1 Rosmarinic Acid C4H medium pass
GtomD09G0011660.1 Rosmarinic Acid C4H low borderline
GtomD09G0014660.1 Rosmarinic Acid C4H medium pass
GtomD09G0014670.1 Rosmarinic Acid C4H low borderline
GtomD09G0014680.1 Rosmarinic Acid C4H low borderline