PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

4696
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
GtomA05G0002140.1 Rosmarinic Acid C4H low borderline
GtomA05G0003640.1 Rosmarinic Acid C4H low borderline
GtomA05G0004540.1 Rosmarinic Acid C4H low borderline
GtomA05G0004540.2 Rosmarinic Acid C4H low borderline
GtomA05G0006890.1 Rosmarinic Acid C4H low borderline
GtomA05G0007370.1 Rosmarinic Acid C4H low borderline
GtomA05G0008910.1 Rosmarinic Acid C4H low borderline
GtomA05G0011790.1 Rosmarinic Acid C4H low borderline
GtomA05G0014480.1 Rosmarinic Acid C4H low borderline
GtomA05G0014480.2 Rosmarinic Acid C4H low borderline
GtomA05G0016090.1 Rosmarinic Acid C4H low borderline
GtomA05G0016100.1 Rosmarinic Acid C4H low borderline
GtomA05G0020350.1 Rosmarinic Acid C4H low borderline
GtomA05G0021180.1 Rosmarinic Acid C4H low borderline
GtomA05G0021190.1 Rosmarinic Acid C4H low borderline
GtomA05G0021440.1 Rosmarinic Acid C4H medium pass
GtomA05G0021450.1 Rosmarinic Acid C4H low borderline
GtomA05G0021460.1 Rosmarinic Acid C4H low borderline
GtomA05G0021470.1 Rosmarinic Acid C4H low borderline
GtomA05G0021480.1 Rosmarinic Acid C4H low borderline
GtomA05G0021490.1 Rosmarinic Acid C4H low borderline
GtomA05G0021500.1 Rosmarinic Acid C4H low borderline
GtomA05G0021550.1 Rosmarinic Acid C4H low borderline
GtomA05G0021970.1 Rosmarinic Acid C4H low borderline
GtomA05G0022420.1 Rosmarinic Acid C4H low borderline
GtomA05G0022450.1 Rosmarinic Acid C4H low borderline
GtomA05G0028600.1 Rosmarinic Acid C4H medium pass
GtomA05G0028610.1 Rosmarinic Acid C4H low borderline
GtomA05G0028810.1 Rosmarinic Acid C4H low borderline
GtomA05G0028820.1 Rosmarinic Acid C4H low borderline
GtomA05G0030700.1 Rosmarinic Acid C4H low borderline
GtomA05G0032390.1 Rosmarinic Acid C4H medium pass
GtomA05G0032400.1 Rosmarinic Acid C4H low borderline
GtomA05G0034800.1 Rosmarinic Acid C4H low borderline
GtomA05G0040040.1 Rosmarinic Acid C4H low borderline
GtomA05G0042560.1 Rosmarinic Acid C4H low borderline
GtomA05G0044400.1 Rosmarinic Acid C4H low borderline
GtomA05G0045530.1 Rosmarinic Acid C4H low borderline
GtomA05G0045530.2 Rosmarinic Acid C4H low borderline
GtomA06G0000910.1 Rosmarinic Acid C4H low borderline
GtomA06G0001540.1 Rosmarinic Acid C4H low borderline
GtomA06G0001570.1 Rosmarinic Acid C4H low borderline
GtomA06G0001580.1 Rosmarinic Acid C4H low borderline
GtomA06G0001600.1 Rosmarinic Acid C4H medium pass
GtomA06G0001610.1 Rosmarinic Acid C4H low borderline
GtomA06G0001620.1 Rosmarinic Acid C4H low borderline
GtomA06G0001640.1 Rosmarinic Acid C4H low borderline
GtomA06G0001650.1 Rosmarinic Acid C4H low borderline
GtomA06G0001660.1 Rosmarinic Acid C4H low borderline
GtomA06G0001700.1 Rosmarinic Acid C4H low borderline