PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

4696
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
GtomA06G0002540.1 Rosmarinic Acid C4H medium pass
GtomA06G0006930.1 Rosmarinic Acid C4H low borderline
GtomA06G0009150.1 Rosmarinic Acid C4H medium pass
GtomA06G0013120.1 Rosmarinic Acid C4H low borderline
GtomA06G0016230.1 Rosmarinic Acid C4H low borderline
GtomA06G0017480.1 Rosmarinic Acid C4H low borderline
GtomA06G0018660.1 Rosmarinic Acid C4H low borderline
GtomA06G0018660.2 Rosmarinic Acid C4H low borderline
GtomA06G0018660.3 Rosmarinic Acid C4H low borderline
GtomA06G0018660.4 Rosmarinic Acid C4H low borderline
GtomA06G0019390.1 Rosmarinic Acid C4H low borderline
GtomA06G0021130.1 Rosmarinic Acid C4H low borderline
GtomA06G0021440.1 Rosmarinic Acid C4H low borderline
GtomA07G0004750.1 Rosmarinic Acid C4H low borderline
GtomA07G0006520.1 Rosmarinic Acid C4H low borderline
GtomA07G0006530.1 Rosmarinic Acid C4H low borderline
GtomA07G0006560.1 Rosmarinic Acid C4H low borderline
GtomA07G0009130.1 Rosmarinic Acid C4H low borderline
GtomA07G0009150.1 Rosmarinic Acid C4H low borderline
GtomA07G0009260.1 Rosmarinic Acid C4H low borderline
GtomA07G0009260.2 Rosmarinic Acid C4H low borderline
GtomA07G0010760.1 Rosmarinic Acid C4H low borderline
GtomA07G0010770.1 Rosmarinic Acid C4H low borderline
GtomA07G0011510.1 Rosmarinic Acid C4H low borderline
GtomA07G0014080.1 Rosmarinic Acid C4H medium pass
GtomA07G0014100.1 Rosmarinic Acid C4H medium pass
GtomA07G0018390.1 Rosmarinic Acid C4H low borderline
GtomA07G0021020.1 Rosmarinic Acid C4H low borderline
GtomA07G0021030.1 Rosmarinic Acid C4H low borderline
GtomA07G0022410.1 Rosmarinic Acid C4H low borderline
GtomA07G0022480.1 Rosmarinic Acid C4H low borderline
GtomA07G0022490.1 Rosmarinic Acid C4H low borderline
GtomA07G0024040.1 Rosmarinic Acid C4H low borderline
GtomA08G0012670.1 Rosmarinic Acid C4H low borderline
GtomA08G0014770.1 Rosmarinic Acid C4H low borderline
GtomA08G0015290.3 Rosmarinic Acid C4H low borderline
GtomA08G0015290.4 Rosmarinic Acid C4H low borderline
GtomA08G0017580.1 Rosmarinic Acid C4H low borderline
GtomA08G0018630.1 Rosmarinic Acid C4H low borderline
GtomA08G0018640.1 Rosmarinic Acid C4H low borderline
GtomA08G0018650.1 Rosmarinic Acid C4H low borderline
GtomA08G0018650.2 Rosmarinic Acid C4H low borderline
GtomA08G0020330.1 Rosmarinic Acid C4H medium pass
GtomA08G0020340.1 Rosmarinic Acid C4H medium pass
GtomA08G0020630.1 Rosmarinic Acid C4H low borderline
GtomA08G0020640.1 Rosmarinic Acid C4H low borderline
GtomA08G0020650.1 Rosmarinic Acid C4H medium pass
GtomA08G0020660.1 Rosmarinic Acid C4H medium pass
GtomA08G0020690.1 Rosmarinic Acid C4H medium pass
GtomA08G0026020.1 Rosmarinic Acid C4H low borderline