PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

5872
Candidate Protein Records
4696
Pathway-Level Records
11761
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Protein/Isoform Record Pathway Family Confidence Status
GtomA08G0027600.1 Rosmarinic Acid C4H low borderline
GtomA08G0028250.1 Rosmarinic Acid C4H low borderline
GtomA09G0002050.1 Rosmarinic Acid C4H medium pass
GtomA09G0004520.1 Rosmarinic Acid C4H low borderline
GtomA09G0004910.1 Rosmarinic Acid C4H low borderline
GtomA09G0005610.1 Rosmarinic Acid C4H medium pass
GtomA09G0005740.1 Rosmarinic Acid C4H medium pass
GtomA09G0008380.1 Rosmarinic Acid C4H medium pass
GtomA09G0011490.1 Rosmarinic Acid C4H low borderline
GtomA09G0015030.1 Rosmarinic Acid C4H medium pass
GtomA09G0015040.1 Rosmarinic Acid C4H low borderline
GtomA09G0015050.1 Rosmarinic Acid C4H low borderline
GtomA09G0015070.1 Rosmarinic Acid C4H medium pass
GtomA09G0022310.1 Rosmarinic Acid C4H medium pass
GtomA09G0022320.1 Rosmarinic Acid C4H low borderline
GtomA09G0022340.1 Rosmarinic Acid C4H low borderline
GtomA09G0022350.1 Rosmarinic Acid C4H medium pass
GtomA09G0022360.1 Rosmarinic Acid C4H low borderline
GtomA09G0022370.1 Rosmarinic Acid C4H low borderline
GtomA09G0022850.1 Rosmarinic Acid C4H low borderline
GtomA09G0022860.1 Rosmarinic Acid C4H low borderline
GtomA09G0022960.1 Rosmarinic Acid C4H low borderline
GtomA09G0023710.1 Rosmarinic Acid C4H medium pass
GtomA09G0023720.1 Rosmarinic Acid C4H medium pass
GtomA10G0001610.1 Rosmarinic Acid C4H low borderline
GtomA10G0006230.1 Rosmarinic Acid C4H medium pass
GtomA10G0006240.1 Rosmarinic Acid C4H low borderline
GtomA10G0011320.1 Rosmarinic Acid C4H medium pass
GtomA10G0014600.1 Rosmarinic Acid C4H low borderline
GtomA10G0014630.1 Rosmarinic Acid C4H low borderline
GtomA10G0014670.1 Rosmarinic Acid C4H low borderline
GtomA10G0021240.1 Rosmarinic Acid C4H medium pass
GtomA10G0021450.1 Rosmarinic Acid C4H low borderline
GtomA10G0023080.1 Rosmarinic Acid C4H low borderline
GtomA10G0023090.1 Rosmarinic Acid C4H low borderline
GtomA10G0023110.1 Rosmarinic Acid C4H low borderline
GtomA10G0023120.1 Rosmarinic Acid C4H low borderline
GtomA10G0023130.1 Rosmarinic Acid C4H low borderline
GtomA10G0023150.1 Rosmarinic Acid C4H low borderline
GtomA10G0023650.1 Rosmarinic Acid C4H low borderline
GtomA10G0023780.1 Rosmarinic Acid C4H low borderline
GtomA10G0023820.1 Rosmarinic Acid C4H low borderline
GtomA10G0023840.1 Rosmarinic Acid C4H low borderline
GtomA10G0023860.1 Rosmarinic Acid C4H low borderline
GtomA10G0025780.1 Rosmarinic Acid C4H low borderline
GtomA10G0028570.1 Rosmarinic Acid C4H low borderline
GtomA10G0028570.2 Rosmarinic Acid C4H low borderline
GtomA10G0028780.1 Rosmarinic Acid C4H low borderline
GtomA11G0001000.1 Rosmarinic Acid C4H low borderline
GtomA11G0001010.1 Rosmarinic Acid C4H low borderline