PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

5872
Candidate Protein Records
4696
Pathway-Level Records
11761
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Protein/Isoform Record Pathway Family Confidence Status
GtomA11G0001020.1 Rosmarinic Acid C4H medium pass
GtomA11G0005160.1 Rosmarinic Acid C4H medium pass
GtomA11G0009400.1 Rosmarinic Acid C4H low borderline
GtomA11G0009420.1 Rosmarinic Acid C4H low borderline
GtomA11G0009430.1 Rosmarinic Acid C4H low borderline
GtomA11G0009430.2 Rosmarinic Acid C4H low borderline
GtomA11G0011300.1 Rosmarinic Acid C4H low borderline
GtomA11G0015400.1 Rosmarinic Acid C4H medium pass
GtomA11G0016740.2 Rosmarinic Acid C4H low borderline
GtomA11G0018500.1 Rosmarinic Acid C4H low borderline
GtomA11G0020220.1 Rosmarinic Acid C4H medium pass
GtomA11G0020380.1 Rosmarinic Acid C4H low borderline
GtomA11G0020890.1 Rosmarinic Acid C4H low borderline
GtomA11G0020890.2 Rosmarinic Acid C4H low borderline
GtomA11G0021320.1 Rosmarinic Acid C4H medium pass
GtomA11G0021330.1 Rosmarinic Acid C4H low borderline
GtomA11G0021340.1 Rosmarinic Acid C4H low borderline
GtomA11G0021350.1 Rosmarinic Acid C4H low borderline
GtomA11G0024770.1 Rosmarinic Acid C4H low borderline
GtomA11G0024780.1 Rosmarinic Acid C4H medium pass
GtomA11G0025530.1 Rosmarinic Acid C4H medium pass
GtomA11G0036310.1 Rosmarinic Acid C4H low borderline
GtomA11G0036330.1 Rosmarinic Acid C4H low borderline
GtomA11G0036340.1 Rosmarinic Acid C4H low borderline
GtomA11G0038840.1 Rosmarinic Acid C4H medium pass
GtomA11G0038920.1 Rosmarinic Acid C4H low borderline
GtomA12G0003060.1 Rosmarinic Acid C4H low borderline
GtomA12G0005900.1 Rosmarinic Acid C4H low borderline
GtomA12G0005900.2 Rosmarinic Acid C4H low borderline
GtomA12G0006190.1 Rosmarinic Acid C4H medium pass
GtomA12G0006880.1 Rosmarinic Acid C4H low borderline
GtomA12G0008590.1 Rosmarinic Acid C4H medium pass
GtomA12G0010090.1 Rosmarinic Acid C4H low borderline
GtomA12G0011480.1 Rosmarinic Acid C4H low borderline
GtomA12G0013130.1 Rosmarinic Acid C4H low borderline
GtomA12G0013310.1 Rosmarinic Acid C4H low borderline
GtomA12G0016230.1 Rosmarinic Acid C4H low borderline
GtomA12G0016890.1 Rosmarinic Acid C4H low borderline
GtomA12G0018500.1 Rosmarinic Acid C4H low borderline
GtomA12G0018870.1 Rosmarinic Acid C4H low borderline
GtomA12G0020940.1 Rosmarinic Acid C4H low borderline
GtomA12G0021350.1 Rosmarinic Acid C4H low borderline
GtomA12G0021360.1 Rosmarinic Acid C4H low borderline
GtomA12G0021370.1 Rosmarinic Acid C4H medium pass
GtomA12G0021900.1 Rosmarinic Acid C4H low borderline
GtomA12G0023120.1 Rosmarinic Acid C4H low borderline
GtomA12G0023120.2 Rosmarinic Acid C4H low borderline
GtomA12G0023460.1 Rosmarinic Acid C4H medium pass
GtomA12G0023470.1 Rosmarinic Acid C4H low borderline
GtomA12G0025250.1 Rosmarinic Acid C4H low borderline